RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CACNG7P62955 275 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 ODF1Q14990 250 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 IQCJQ1A5X6 159 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 NSUN5P1Q3KNT7 163 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 ZNF324O75467 553 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 ASIPP42127 132 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 OR10AG1Q8NH19 301 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 SNHG12Q9BXW3 62 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 MSRB1Q9NZV6 116 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 SORL1Q92673 2214 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 WNK1Q9H4A3 2382 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 H3BVH4 76 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 U3KQK5 164 aa8.49□□□□□ -1.05
SMARCAL1-203ENST00000392128 FLNBO75369 2602 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 H3BMM0 161 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 M0R2Z0 102 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 TDRG1Q3Y452 100 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 CSTL1Q9H114 145 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 SCRT2Q9NQ03 307 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 TRAV12-3A0A0B4J271 114 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 SPINK13Q1W4C9 94 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 FAM159AQ6UWV7 190 aa8.48□□□□□ -1.05
SMARCAL1-203ENST00000392128 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-203ENST00000392128 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-203ENST00000392128 SAMD10Q9BYL1 202 aa8.47□□□□□ -1.05
SMARCAL1-203ENST00000392128 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 GNRH2O43555 120 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 SAP30O75446 220 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 SPANXN1Q5VSR9 72 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 ORMDL3Q8N138 153 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 OR2K2Q8NGT1 345 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 RNF185Q96GF1 192 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.05
SMARCAL1-203ENST00000392128 D6R8Y8 96 aa8.46□□□□□ -1.06
SMARCAL1-203ENST00000392128 IGLV1-51P01701 117 aa8.46□□□□□ -1.06
SMARCAL1-203ENST00000392128 RNASE3P12724 160 aaKnown RBP8.46□□□□□ -1.06
SMARCAL1-203ENST00000392128 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.06
SMARCAL1-203ENST00000392128 NIT1Q86X76 327 aa8.46□□□□□ -1.06
SMARCAL1-203ENST00000392128 URB1-AS1Q96HZ7 61 aa8.46□□□□□ -1.06
SMARCAL1-203ENST00000392128 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 RBMY1BA6NDE4 496 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 RBMY1EA6NEQ0 496 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 RBMY1DP0C7P1 496 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 AMTP48728 403 aa8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 PHLDA3Q9Y5J5 127 aa8.45□□□□□ -1.06
SMARCAL1-203ENST00000392128 CRXO43186 299 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 HSBP1O75506 76 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 NXPH4O95158 308 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 CKS2P33552 79 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 TIMM8BQ9Y5J9 83 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 PF4P02776 101 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 CD7P09564 240 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 PMCHP20382 165 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 EVI2AP22794 236 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
SMARCAL1-203ENST00000392128 F8P00451 2351 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 OR11H12B2RN74 326 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 Q6ZWC4 215 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 FAM110AQ9BQ89 295 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 LAMTOR2Q9Y2Q5 125 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 IGHV3-16A0A0C4DH30 117 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 M0R381 172 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 FAM19A2Q8N3H0 131 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 MUC4Q99102 2169 aa8.43□□□□□ -1.06
SMARCAL1-203ENST00000392128 FXYD7P58549 80 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 C9orf85Q96MD7 179 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 RBMY1A1P0DJD3 496 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 RBMY1CP0DJD4 496 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 Q8N1Y9 231 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 CITED1Q99966 193 aa8.42□□□□□ -1.06
SMARCAL1-203ENST00000392128 NCR2O95944 276 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 NPYP01303 97 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 STHQ8IWL8 128 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 C20orf144Q9BQM9 153 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 TRGV11A0A075B6L2 103 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 SPRY2O43597 315 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 ZNF664Q8N3J9 261 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 AP1S3Q96PC3 154 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 DPH3P1Q9H4G8 78 aa8.41□□□□□ -1.06
SMARCAL1-203ENST00000392128 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
SMARCAL1-203ENST00000392128 CBY3A6NI87 242 aa8.4□□□□□ -1.06
SMARCAL1-203ENST00000392128 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms