RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 DCHS2Q6V1P9 2916 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 KIDINS220Q9ULH0 1771 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 FNDC1Q4ZHG4 1894 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 TMEM131Q92545 1883 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF106Q9H2Y7 1883 aaKnown RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 TP53BP1Q12888 1972 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 SHROOM3Q8TF72 1996 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 NCOA6Q14686 2063 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 SDK2Q58EX2 2172 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 FREM1Q5H8C1 2179 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 ARFGEF3Q5TH69 2177 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 MED12Q93074 2177 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 MED13Q9UHV7 2174 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 BAZ2BQ9UIF8 2168 aaKnown RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 PKDREJQ9NTG1 2253 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 VPS13AQ96RL7 3174 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 OVOS2A0A0G2JMS6 1433 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 OVOS2A0A0J9YW53 1432 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DAPK1P53355 1430 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 EEA1Q15075 1411 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 OVOS2Q6IE36 1432 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 RRBP1Q9P2E9 1410 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 EPRSP07814 1512 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 ARHGAP5Q13017 1502 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 URB2Q14146 1524 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DCAF1Q9Y4B6 1507 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TMEM131LA2VDJ0 1609 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF21BO75037 1637 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 NRXN3Q9Y4C0 1643 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PHLPP1O60346 1717 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PRDM2Q13029 1718 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KNDC1Q76NI1 1749 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 NRXN2Q9P2S2 1712 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 IFT172Q9UG01 1749 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PARP4Q9UKK3 1724 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 ARID2Q68CP9 1835 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 VIRMAQ69YN4 1812 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 NCKAP5O14513 1909 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 MTCL1Q9Y4B5 1905 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SCN5AQ14524 2016 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DNAJC13O75165 2243 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRANK1O15050 2925 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 FRYLO94915 3013 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TNRC6AQ8NDV7 1962 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PCDH15Q96QU1 1955 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KIAA1549Q9HCM3 1950 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRPM7Q96QT4 1865 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TANC1Q9C0D5 1861 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 MUC22E2RYF6 1773 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PIK3C2AO00443 1686 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KDM5AP29375 1690 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SCN7AQ01118 1682 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SHPRHQ149N8 1683 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PLCH1Q4KWH8 1693 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PREX1Q8TCU6 1659 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 LMO7Q8WWI1 1683 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SYNMO15061 1565 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DIP2AQ14689 1571 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 NWD1Q149M9 1564 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TTC37Q6PGP7 1564 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 THOC2Q8NI27 1593 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 INO80Q9ULG1 1556 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 LRRC9Q6ZRR7 1453 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 RAPGEF2Q9Y4G8 1499 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 ANKRD36BQ8N2N9 1353 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PLIN4Q96Q06 1357 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV7-3A0A075B6L6 115 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV25-1A0A075B6N4 114 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV36DV7A0A075B6V5 113 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SYNJ2BP-COX16A0A087WUM0 186 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A096LPI6 279 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV8-1A0A0A6YYK1 113 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV2A0A0B4J234 112 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV13-2A0A0B4J235 113 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV13-1A0A0B4J241 112 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV21A0A0B4J279 112 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0D9SFI3 127 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0G2JND7 137 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV7-7A0A0K0K1E9 115 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 LOC100506127A0A0U1RQW1 187 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 CTXND1A0A1B0GTU2 59 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A1B0GU69 56 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PNMA8CA0A1B0GUJ8 204 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 UBE2L5PA0A1B0GUS4 154 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A1B0GV50 99 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TCRBV3S1A0A5B6 114 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 hADV29S1A0JD25 119 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 IGLC7A0M8Q6 106 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DAPL1A0PJW8 107 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 FUOMA2VDF0 154 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 MAP1LC3B2A6NCE7 125 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 FAM24AA6NFZ4 105 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 LINC01546A6NGU7 62 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A6NIN4 97 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SMIM23A6NLE4 172 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TRPC5OSA6NMA1 111 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TMCO5BA8MYB1 307 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms