RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 WIZO95785 1651 aa-4.29□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PARP4Q9UKK3 1724 aaKnown RBP-4.29□□□□□ -3.1
RNU6-1340P-201ENST00000384438 EEA1Q15075 1411 aa-4.29□□□□□ -3.1
RNU6-1340P-201ENST00000384438 FAM236DA0A1B0GTK5 79 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MGAT4DA6NG13 374 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PPP1R17O96001 155 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 FAM236CP0DP71 79 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SCGB1A1P11684 91 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 STOMP27105 288 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CDC34P49427 236 aaPredicted RBP-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 H2BFSP57053 126 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RAB8AP61006 207 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RANP62826 216 aaKnown RBP-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 BST2Q10589 180 aaKnown RBP-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 JOSD1Q15040 202 aaPredicted RBP-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 FBXO48Q5FWF7 155 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 NMSQ5H8A3 153 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 ZNF321PQ8N8H1 164 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 OR51A4Q8NGJ6 313 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 OR51A7Q8NH64 312 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TMEM263Q8WUH6 116 aaKnown RBP-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 ANKRD36BP1Q96IX9 119 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 VPS25Q9BRG1 176 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 ACOT13Q9NPJ3 140 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 METTL1Q9UBP6 276 aaKnown RBP-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MED23Q9ULK4 1368 aa-4.3□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PREX1Q8TCU6 1659 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 C20orf202A1L168 122 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CST7O76096 145 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 IFNA21P01568 189 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 IFNW1P05000 195 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MYL2P10916 166 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 UBE2D1P51668 147 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CXCR4P61073 352 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RHOBP62745 196 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CBX1P83916 185 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MYL5Q02045 173 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 COTL1Q14019 142 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MRPL23Q16540 153 aaKnown RBP-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SCIMPQ6UWF3 145 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SSX9Q7RTT3 188 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 OR6N2Q8NGY6 317 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 BRK1Q8WUW1 75 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PPDPFLQ8WWR9 84 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TOMM6Q96B49 74 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TMEM43Q9BTV4 400 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TPT1P8Q9HAU6 139 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CHRAC1Q9NRG0 131 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 NOP58Q9Y2X3 529 aaKnown RBP-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MPC1Q9Y5U8 109 aa-4.31□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RGPD3A6NKT7 1758 aaPredicted RBP-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RGPD4Q7Z3J3 1758 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 BTAF1O14981 1849 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 DAPL1A0PJW8 107 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 OTCP00480 354 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 HPCAP84074 193 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CAV1Q03135 178 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 STK38Q15208 465 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TMEM78Q5T7P6 136 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 OR5AK3PQ8NH89 298 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 NINJ2Q9NZG7 142 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CD109Q6YHK3 1445 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MAPKBP1O60336 1514 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MAGI3Q5TCQ9 1506 aa-4.32□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PNMA8CA0A1B0GUJ8 204 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PGRMC1O00264 195 aaKnown RBP-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 LIN7AO14910 233 aaPredicted RBP-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CST4P01036 141 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RRM2P31350 389 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SFNP31947 248 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TTC33Q6PID6 262 aaPredicted RBP-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PET117Q6UWS5 81 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PIGXQ8TBF5 258 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 STAG3L4Q8TBR4 150 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PPM1MQ96MI6 270 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CCDC43Q96MW1 224 aaKnown RBP-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 PANX1Q96RD7 426 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 ARHGEF10O15013 1369 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 EDC4Q6P2E9 1401 aaKnown RBP-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CEP164Q9UPV0 1460 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 MYH8P13535 1937 aa-4.33□□□□□ -3.1
RNU6-1340P-201ENST00000384438 C1orf196B1AJZ1 125 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 STX6O43752 255 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SIX6O95475 246 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 TRACP01848 142 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 ADCYAP1P18509 176 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SEC61GP60059 68 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 UBE2G2P60604 165 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 ATP6V0D1P61421 351 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 B2MP61769 119 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 YWHAEP62258 255 aaKnown RBP-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RPL19P84098 196 aaKnown RBP-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 FABP9Q0Z7S8 132 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 RAB11BQ15907 218 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 CCDC91Q7Z6B0 441 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 FAM45AQ8TCE6 357 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 GLYATL2Q8WU03 294 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 LCN9Q8WX39 176 aa-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 C11orf68Q9H3H3 251 aaKnown RBP-4.34□□□□□ -3.1
RNU6-1340P-201ENST00000384438 SDHAF2Q9NX18 166 aa-4.34□□□□□ -3.1
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms