RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
CHD3-203ENST00000380358 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 C16orf74Q96GX8 76 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 IGHV4-61A0A0C4DH41 118 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 H3BRN7 92 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 WNK1Q9H4A3 2382 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 IGKV1D-37A0A075B6S9 117 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 TICRRQ7Z2Z1 1910 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 UBE2D1P51668 147 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 LOXP28300 417 aaPredicted RBP9.75□□□□□ -0.85
CHD3-203ENST00000380358 B3GALT5-AS1P59052 145 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 DEFB125Q8N687 156 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 NBASA2RRP1 2371 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 COL4A5P29400 1685 aa9.75□□□□□ -0.85
CHD3-203ENST00000380358 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 K7EM74 188 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 NDUFA1O15239 70 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 YPEL3P61236 119 aaPredicted RBP9.74□□□□□ -0.85
CHD3-203ENST00000380358 LY6G6CO95867 125 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 GFRA4Q9GZZ7 299 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 Q6ZVH6 145 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 PYY3Q5JQD4 70 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 ZNF833PQ6ZTB9 187 aa9.74□□□□□ -0.85
CHD3-203ENST00000380358 Q6ZR03 302 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 UBR3Q6ZT12 1888 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 GREB1LQ9C091 1923 aaPredicted RBP9.73□□□□□ -0.85
CHD3-203ENST00000380358 WISP1O95388 367 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 WT1-ASQ06250 92 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 PCP2Q8IVA1 136 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 F8VRH5 84 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 CCL25O15444 150 aa9.73□□□□□ -0.85
CHD3-203ENST00000380358 OPRPNQ99935 248 aaPredicted RBP9.73□□□□□ -0.85
CHD3-203ENST00000380358 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 HERV-K104P63124 156 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 FAM19A1Q7Z5A9 133 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 C11orf45Q8TAV5 145 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 AJUBAQ96IF1 538 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 RBBP6Q7Z6E9 1792 aaKnown RBP9.72□□□□□ -0.85
CHD3-203ENST00000380358 A0A1W2PPM0 123 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 RPL39P62891 51 aaKnown RBP9.72□□□□□ -0.85
CHD3-203ENST00000380358 SPAG11BQ08648 103 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 NHSL1Q5SYE7 1610 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 CLEC2BQ92478 149 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 X6R8D5 127 aa9.72□□□□□ -0.85
CHD3-203ENST00000380358 COL11A2P13942 1736 aaPredicted RBP9.71□□□□□ -0.85
CHD3-203ENST00000380358 SPRNQ5BIV9 151 aa9.71□□□□□ -0.85
CHD3-203ENST00000380358 RITA1Q96K30 269 aa9.71□□□□□ -0.85
CHD3-203ENST00000380358 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.85
CHD3-203ENST00000380358 ZNF503-AS2A6NEH8 195 aa9.71□□□□□ -0.85
CHD3-203ENST00000380358 IGHV2-5P01817 119 aa9.71□□□□□ -0.85
CHD3-203ENST00000380358 ZNF493Q6ZR52 646 aa9.71□□□□□ -0.85
CHD3-203ENST00000380358 TNS1Q9HBL0 1735 aaKnown RBP9.71□□□□□ -0.86
CHD3-203ENST00000380358 SMIM27A0A1W2PRY6 76 aa9.71□□□□□ -0.86
CHD3-203ENST00000380358 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.86
CHD3-203ENST00000380358 Q8NFD4 153 aa9.71□□□□□ -0.86
CHD3-203ENST00000380358 K7EP13 123 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 IGLL1P15814 213 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 IGF2-ASQ6U949 168 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 TEX49A0A1B0GTD5 131 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 F8W1H4 67 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 LHFPL1Q86WI0 220 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 CFC1BP0CG36 223 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 CFC1P0CG37 223 aa9.7□□□□□ -0.86
CHD3-203ENST00000380358 MUC4Q99102 2169 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 IGLC7A0M8Q6 106 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 Q6ZWC4 215 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 Q8N9W7 124 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 WI2-2373I1.2A0A1W2PRP0 233 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 UBE2D3P61077 147 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
CHD3-203ENST00000380358 LY6G6EA0A0G2JKS1 128 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 TRBV12-3P01733 135 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 K7ERS5 55 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 USP17L23D6RBM5 183 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 AGPAT4-IT1Q9H0P7 198 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 J3QRE1 110 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 SBF1O95248 1867 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 TRAV23DV6A0A075B6W5 121 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
CHD3-203ENST00000380358 COX8AP10176 69 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 ARID2Q68CP9 1835 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 K7EP34 96 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
CHD3-203ENST00000380358 MED13LQ71F56 2210 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 NDUFC2O95298 119 aa9.67□□□□□ -0.86
CHD3-203ENST00000380358 SCN10AQ9Y5Y9 1956 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms