RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PEF1Q9UBV8 284 aaKnown RBP5.81□□□□□ -1.48
CDKL5-202ENST00000379996 RABAC1Q9UI14 185 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 K7EMT4 169 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 HIST1H1AQ02539 215 aaPredicted RBP5.81□□□□□ -1.48
CDKL5-202ENST00000379996 SLC25A34Q6PIV7 304 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 PRIMA1Q86XR5 153 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 ORMDL3Q8N138 153 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 FAM19A4Q96LR4 140 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 AAMDCQ9H7C9 122 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 HIVEP2P31629 2446 aa5.81□□□□□ -1.48
CDKL5-202ENST00000379996 SOCS3O14543 225 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 IGFL4Q6B9Z1 124 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.8□□□□□ -1.48
CDKL5-202ENST00000379996 OR1N2Q8NGR9 330 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 MSRB1Q9NZV6 116 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 LINC00527Q9UJ94 153 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 MUC21A0A0G2JKD1 596 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 MUC21A0A140T8X8 626 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 MUC21Q5SSG8 566 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 S100A7AQ86SG5 101 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 RNASE8Q8TDE3 154 aaKnown RBP5.8□□□□□ -1.48
CDKL5-202ENST00000379996 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 FN1P02751 2386 aaKnown RBP5.8□□□□□ -1.48
CDKL5-202ENST00000379996 SNAI2O43623 268 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 C10orf99Q6UWK7 81 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 NRACQ8N912 160 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 ZNF738Q8NE65 137 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 HHLA3Q9XRX5 114 aa5.8□□□□□ -1.48
CDKL5-202ENST00000379996 CLEC3BP05452 202 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 KRTAP10-3P60369 221 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 ERCC8Q13216 396 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 C9orf47Q6ZRZ4 202 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
CDKL5-202ENST00000379996 SMKR1H3BMG3 65 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 HBDP02042 147 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 CSN3P07498 182 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 ARL3P36405 182 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 KRTAP21-3Q3LHN1 58 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 UFSP1Q6NVU6 142 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 APRG1Q8IVJ8 170 aa5.79□□□□□ -1.48
CDKL5-202ENST00000379996 CD28P10747 220 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 KRTAP24-1Q3LI83 254 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 PRR9Q5T870 116 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 Q6ZQT7 251 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 RNF182Q8N6D2 247 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 CSPG4Q6UVK1 2322 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 SIVA1O15304 175 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 CSN1S1P47710 185 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 CLEC19AQ6UXS0 136 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 GLMPQ8WWB7 406 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 ACANP16112 2415 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 LINC01619G3V211 115 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 NUDT3O95989 172 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 CT45A10P0DMU9 189 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 GPR183P32249 361 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 BMI1P35226 326 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 POM121L12Q8N7R1 296 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 TMEM158Q8WZ71 300 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 C20orf173Q96LM9 149 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 SLC50A1Q9BRV3 221 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 AGPAT4-IT1Q9H0P7 198 aa5.78□□□□□ -1.48
CDKL5-202ENST00000379996 FLNBO75369 2602 aaKnown RBP5.78□□□□□ -1.48
CDKL5-202ENST00000379996 HLA-DRB4P13762 266 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 FA2HQ7L5A8 372 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 HLA-DRB4X5D2U9 266 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 TMSB15BA0A087X1C1 80 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 C12orf54Q6X4T0 127 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 UFC1Q9Y3C8 167 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 TRAV8-6A0A0B4J262 113 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 FABP5P3A8MUU1 101 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 PPBPP02775 128 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 PRSS3P2Q8NHM4 247 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 PEMTQ9UBM1 199 aa5.77□□□□□ -1.49
CDKL5-202ENST00000379996 IGHV4OR15-8A0A075B7B6 117 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 A0A087WW49 117 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 TRBV12-3P01733 135 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 CACNG7P62955 275 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 CITED2Q99967 270 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-202ENST00000379996 F8P00451 2351 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 LOC389332A0A1B0GUA5 103 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 FCER1GP30273 86 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 RIPPLY3P57055 190 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 FXYD7P58549 80 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 IFI27L1Q96BM0 104 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 DKK2Q9UBU2 259 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 IGHV3OR16-8A0A075B7F1 116 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 IGKV2D-26A0A0A0MRZ7 120 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 TRAV2A0A0B4J234 112 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 B5MCH6 92 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 CDKN1BP46527 198 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 TWIST1Q15672 202 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 OR2K2Q8NGT1 345 aa5.76□□□□□ -1.49
CDKL5-202ENST00000379996 GATA1P15976 413 aaPredicted RBP5.75□□□□□ -1.49
CDKL5-202ENST00000379996 EVI2AP22794 236 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 HOXD3P31249 432 aaPredicted RBP5.75□□□□□ -1.49
CDKL5-202ENST00000379996 SEC11AP67812 179 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 DGAT2L7PQ6IED9 249 aa5.75□□□□□ -1.49
CDKL5-202ENST00000379996 ZFAND2AQ8N6M9 145 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms