RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 TEX36Q5VZQ5 186 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 HIST2H2BDQ6DRA6 164 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 MBD3L2Q8NHZ7 208 aaPredicted RBP9.44□□□□□ -0.9
SF1-204ENST00000377390 RNASE6Q93091 150 aaKnown RBP9.44□□□□□ -0.9
SF1-204ENST00000377390 TM2D2Q9BX73 214 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 INS-IGF2F8WCM5 200 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
SF1-204ENST00000377390 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 ZNF688P0C7X2 276 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 FHL3Q13643 280 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 CFHR4Q92496 578 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 HRNRQ86YZ3 2850 aaPredicted RBP9.43□□□□□ -0.9
SF1-204ENST00000377390 THBDP07204 575 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 C5orf64Q2M2E5 130 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 FAM159AQ6UWV7 190 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 PRADC1Q9BSG0 188 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 NBR2O15453 112 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 DLX6P56179 175 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 LY6EQ16553 131 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 ANKRD29Q8N6D5 301 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
SF1-204ENST00000377390 Q8N8P6 123 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 RAB1BQ9H0U4 201 aa9.43□□□□□ -0.9
SF1-204ENST00000377390 MYMXA0A1B0GTQ4 84 aa9.42□□□□□ -0.9
SF1-204ENST00000377390 FCN3O75636 299 aa9.42□□□□□ -0.9
SF1-204ENST00000377390 NDPQ00604 133 aa9.42□□□□□ -0.9
SF1-204ENST00000377390 H7C1H1 209 aa9.42□□□□□ -0.9
SF1-204ENST00000377390 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
SF1-204ENST00000377390 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
SF1-204ENST00000377390 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
SF1-204ENST00000377390 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 Q6ZQT7 251 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 RNF185Q96GF1 192 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 A0A087WX48 190 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 PRSS2P07478 247 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 IFITM1P13164 125 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
SF1-204ENST00000377390 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 LINC00574Q9H8X3 128 aa9.41□□□□□ -0.9
SF1-204ENST00000377390 PLNP26678 52 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
SF1-204ENST00000377390 CLEC19AQ6UXS0 136 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.9
SF1-204ENST00000377390 F8VRH5 84 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 TSPAN13O95857 204 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 TCL1BO95988 128 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 CFAP126Q5VTH2 177 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 LINC00311Q8N616 119 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 DPM3Q9P2X0 92 aa9.4□□□□□ -0.9
SF1-204ENST00000377390 K7ENP7 123 aa9.4□□□□□ -0.91
SF1-204ENST00000377390 PSMG4Q5JS54 123 aa9.4□□□□□ -0.91
SF1-204ENST00000377390 TMEM219Q86XT9 240 aa9.4□□□□□ -0.91
SF1-204ENST00000377390 U3KQK5 164 aa9.4□□□□□ -0.91
SF1-204ENST00000377390 FBN2P35556 2912 aa9.4□□□□□ -0.91
SF1-204ENST00000377390 TMEM262E9PQX1 116 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 ID1P41134 155 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 PDE6HQ13956 83 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
SF1-204ENST00000377390 DEFB1P60022 68 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 MRGPRG-AS1Q2M3A8 158 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 NBL1P41271 181 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 NDUFV3P56181 108 aaKnown RBP9.39□□□□□ -0.91
SF1-204ENST00000377390 FAM74A4Q5TZK3 123 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
SF1-204ENST00000377390 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
SF1-204ENST00000377390 SLC25A20O43772 301 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
SF1-204ENST00000377390 PLEKHB2Q96CS7 222 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 CRLF1O75462 422 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 CEACAM4O75871 244 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 HERVK_113P61574 105 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 ZNF672Q499Z4 452 aaPredicted RBP9.38□□□□□ -0.91
SF1-204ENST00000377390 C2orf66Q6UXQ4 117 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
SF1-204ENST00000377390 TRAV2A0A0B4J234 112 aa9.37□□□□□ -0.91
SF1-204ENST00000377390 C15orf32Q32M92 178 aa9.37□□□□□ -0.91
SF1-204ENST00000377390 HIST2H2BCQ6DN03 193 aa9.37□□□□□ -0.91
SF1-204ENST00000377390 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
SF1-204ENST00000377390 NPC2P61916 151 aa9.37□□□□□ -0.91
SF1-204ENST00000377390 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
SF1-204ENST00000377390 FLNAP21333 2647 aaKnown RBP9.37□□□□□ -0.91
SF1-204ENST00000377390 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
SF1-204ENST00000377390 LGALS1P09382 135 aaKnown RBP9.36□□□□□ -0.91
SF1-204ENST00000377390 ZNF56Q15929 161 aa9.36□□□□□ -0.91
SF1-204ENST00000377390 TIMD4Q96H15 378 aa9.36□□□□□ -0.91
SF1-204ENST00000377390 ZNF256Q9Y2P7 627 aaPredicted RBP9.36□□□□□ -0.91
SF1-204ENST00000377390 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
SF1-204ENST00000377390 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
SF1-204ENST00000377390 GCN1Q92616 2671 aaKnown RBP9.36□□□□□ -0.91
SF1-204ENST00000377390 IGLV1-47P01700 117 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms