RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 TRAV12-3A0A0B4J271 114 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 A0A0U1RRA0 63 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 H3BT86 120 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 LYZP61626 148 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 TRAV26-2A0A0B4J265 109 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 SS18L1O75177 396 aaPredicted RBP8.22□□□□□ -1.09
TRERF1-203ENST00000372917 CD177Q8N6Q3 437 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 ACYP1P07311 99 aa8.21□□□□□ -1.09
TRERF1-203ENST00000372917 CDSNQ15517 529 aa8.21□□□□□ -1.09
TRERF1-203ENST00000372917 RNF185Q96GF1 192 aa8.21□□□□□ -1.09
TRERF1-203ENST00000372917 WDR86Q86TI4 376 aa8.21□□□□□ -1.1
TRERF1-203ENST00000372917 ERCC8Q13216 396 aa8.21□□□□□ -1.1
TRERF1-203ENST00000372917 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 DLX1P56177 255 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 C14orf178Q8N769 122 aaPredicted RBP8.2□□□□□ -1.1
TRERF1-203ENST00000372917 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
TRERF1-203ENST00000372917 GP9P14770 177 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 IGHV1-2P23083 117 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 SERP2Q8N6R1 65 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 TMEM263Q8WUH6 116 aaKnown RBP8.2□□□□□ -1.1
TRERF1-203ENST00000372917 FSTL3O95633 263 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 SDIM1Q6ZPB5 146 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 C17orf77Q96MU5 243 aa8.2□□□□□ -1.1
TRERF1-203ENST00000372917 NAV3Q8IVL0 2385 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 PRSS2P07478 247 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 CD40P25942 277 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 IQCF6A8MYZ5 107 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
TRERF1-203ENST00000372917 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 C17orf100A8MU93 164 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 K7ENP7 123 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 UPK2O00526 184 aa8.19□□□□□ -1.1
TRERF1-203ENST00000372917 RPL18AQ02543 176 aaKnown RBP8.19□□□□□ -1.1
TRERF1-203ENST00000372917 CHD9Q3L8U1 2897 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 PRB3Q04118 309 aaPredicted RBP8.18□□□□□ -1.1
TRERF1-203ENST00000372917 TMEM75Q8N9X5 138 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 NEXN-AS1Q8NBZ9 246 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 PRR7Q8TB68 274 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 TMEM243Q9BU79 118 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 BDP1A6H8Y1 2624 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 CEP192Q8TEP8 1941 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 COX6B1P14854 86 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 RNF7Q9UBF6 113 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 IGKV1D-37A0A075B6S9 117 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 TRBV7-1A0A0A6YYK4 115 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 A0A0B4J2C4 111 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 IGKV3D-7A0A0C4DH55 119 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 COX7A1P24310 79 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
TRERF1-203ENST00000372917 NBR2O15453 112 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 EGR2P11161 476 aaPredicted RBP8.17□□□□□ -1.1
TRERF1-203ENST00000372917 C1orf229Q6ZS94 237 aaPredicted RBP8.17□□□□□ -1.1
TRERF1-203ENST00000372917 ZCCHC24Q8N2G6 241 aaKnown RBP8.17□□□□□ -1.1
TRERF1-203ENST00000372917 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 CCL21O00585 134 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 FAM90A1Q86YD7 464 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
TRERF1-203ENST00000372917 FAM216BQ8N7L0 139 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 NUP37Q8NFH4 326 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
TRERF1-203ENST00000372917 IGHV3-64A0A075B6Q5 118 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 TMEM178BH3BS89 294 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 NDUFB3O43676 98 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-203ENST00000372917 CXCL5P42830 114 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 UBE2E1P51965 193 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 FAM223AQ8IWN6 122 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 ICOSQ9Y6W8 199 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRERF1-203ENST00000372917 IGKV1-16P04430 117 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 SAA2P0DJI9 122 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-203ENST00000372917 C5orf38Q86SI9 138 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 LY6LH3BQJ8 138 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
TRERF1-203ENST00000372917 LY6G6EA0A0G2JKS1 128 aa8.15□□□□□ -1.1
TRERF1-203ENST00000372917 C11orf86A6NJI1 115 aa8.15□□□□□ -1.1
TRERF1-203ENST00000372917 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
TRERF1-203ENST00000372917 ZNRD1Q9P1U0 126 aa8.15□□□□□ -1.1
TRERF1-203ENST00000372917 U3KQA8 63 aa8.15□□□□□ -1.1
TRERF1-203ENST00000372917 A0A087WVE0 104 aa8.15□□□□□ -1.1
TRERF1-203ENST00000372917 SAA1P0DJI8 122 aaPredicted RBP8.15□□□□□ -1.1
TRERF1-203ENST00000372917 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.11
TRERF1-203ENST00000372917 LINC01546A6NGU7 62 aa8.15□□□□□ -1.11
TRERF1-203ENST00000372917 Q8TAT8 98 aa8.15□□□□□ -1.11
TRERF1-203ENST00000372917 SPRR3Q9UBC9 169 aa8.15□□□□□ -1.11
TRERF1-203ENST00000372917 MALRD1Q5VYJ5 2156 aa8.14□□□□□ -1.11
TRERF1-203ENST00000372917 IGLV2-18A0A075B6J9 118 aa8.14□□□□□ -1.11
TRERF1-203ENST00000372917 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
TRERF1-203ENST00000372917 FHL2Q14192 279 aa8.14□□□□□ -1.11
TRERF1-203ENST00000372917 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
TRERF1-203ENST00000372917 ZNF71Q9NQZ8 489 aaPredicted RBP8.14□□□□□ -1.11
TRERF1-203ENST00000372917 TRAV12-2A0A075B6T6 113 aa8.14□□□□□ -1.11
TRERF1-203ENST00000372917 NTN3O00634 580 aaPredicted RBP8.14□□□□□ -1.11
TRERF1-203ENST00000372917 IGKV2-40A0A087WW87 121 aaPredicted RBP8.13□□□□□ -1.11
TRERF1-203ENST00000372917 E7EUB6 86 aa8.13□□□□□ -1.11
TRERF1-203ENST00000372917 IGKV2D-40P01614 121 aaPredicted RBP8.13□□□□□ -1.11
TRERF1-203ENST00000372917 TRGV3P03979 118 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms