RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 TRAV8-2A0A0B4J237 113 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 PRAC2D3DTV9 90 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 SLC25A16P16260 332 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 Q6AWC8 147 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 PVRIGQ6DKI7 326 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 Q8N6K4 173 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 ZNF491Q8N8L2 437 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 A0A1B0GW15 77 aa11.65□□□□□ -0.55
PHTF1-202ENST00000369598 SHANK2-AS3Q9BTD1 123 aa11.65□□□□□ -0.55
PHTF1-202ENST00000369598 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.55
PHTF1-202ENST00000369598 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
PHTF1-202ENST00000369598 CENPEQ02224 2701 aa11.65□□□□□ -0.55
PHTF1-202ENST00000369598 CRLF1O75462 422 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 MSMBP08118 114 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 ZFAND6Q6FIF0 208 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 TSPAN13O95857 204 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 TCL1BO95988 128 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
PHTF1-202ENST00000369598 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 VPS13CQ709C8 3753 aa11.64□□□□□ -0.55
PHTF1-202ENST00000369598 GAGE5Q13069 117 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 GAGE6Q13070 117 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
PHTF1-202ENST00000369598 ANKRD29Q8N6D5 301 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 TRBV7-3A0A075B6L6 115 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 TRAV4A0A0B4J268 109 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 IGHV1-69DA0A0B4J2H0 117 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 IGHV1-69P01742 117 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 PRADC1Q9BSG0 188 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 ZMAT4Q9H898 229 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
PHTF1-202ENST00000369598 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
PHTF1-202ENST00000369598 B4DSR2 109 aa11.62□□□□□ -0.55
PHTF1-202ENST00000369598 LGALS1P09382 135 aaKnown RBP11.62□□□□□ -0.55
PHTF1-202ENST00000369598 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
PHTF1-202ENST00000369598 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
PHTF1-202ENST00000369598 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
PHTF1-202ENST00000369598 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
PHTF1-202ENST00000369598 NXT2Q9NPJ8 142 aaKnown RBP11.62□□□□□ -0.55
PHTF1-202ENST00000369598 CELSR2Q9HCU4 2923 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 KRTAP10-9P60411 292 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 Q8N9W7 124 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 SCGB3A1Q96QR1 104 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 C9JAW5 83 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 I3L2K1 104 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 M0R381 172 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 ATP5LO75964 103 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
PHTF1-202ENST00000369598 ANKRD17O75179 2603 aaKnown RBP11.6□□□□□ -0.55
PHTF1-202ENST00000369598 LAGE3Q14657 143 aa11.6□□□□□ -0.55
PHTF1-202ENST00000369598 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
PHTF1-202ENST00000369598 H3BRN7 92 aa11.6□□□□□ -0.55
PHTF1-202ENST00000369598 TRBV7-9A0A0J9YWB2 115 aa11.6□□□□□ -0.55
PHTF1-202ENST00000369598 K7EIM0 57 aa11.6□□□□□ -0.55
PHTF1-202ENST00000369598 CHD6Q8TD26 2715 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 USP9YO00507 2555 aaPredicted RBP11.59□□□□□ -0.55
PHTF1-202ENST00000369598 A0A087WX48 190 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 IGHV4-38-2P0DP08 117 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 NDPQ00604 133 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 ZNF575Q86XF7 245 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 C11orf21Q9P2W6 132 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 POLQO75417 2590 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 A8MWV9 139 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 NHLRC4P0CG21 123 aaPredicted RBP11.59□□□□□ -0.55
PHTF1-202ENST00000369598 DEFB1P60022 68 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 Q6ZS46 218 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 PPDPFLQ8WWR9 84 aa11.59□□□□□ -0.55
PHTF1-202ENST00000369598 RPL39LQ96EH5 51 aaKnown RBP11.59□□□□□ -0.55
PHTF1-202ENST00000369598 FBN2P35556 2912 aa11.58□□□□□ -0.56
PHTF1-202ENST00000369598 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
PHTF1-202ENST00000369598 GAGE2EQ4V326 116 aa11.58□□□□□ -0.56
PHTF1-202ENST00000369598 TTC32Q5I0X7 151 aa11.58□□□□□ -0.56
PHTF1-202ENST00000369598 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
PHTF1-202ENST00000369598 GAGE2DQ9UEU5 116 aa11.58□□□□□ -0.56
PHTF1-202ENST00000369598 MGPP08493 103 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.57□□□□□ -0.563e-6■■■■■ 32
PHTF1-202ENST00000369598 PTPN13Q12923 2485 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 ZNF688P0C7X2 276 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 IGLC6P0CF74 106 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 TMEM219Q86XT9 240 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 Q8N8P6 123 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 LINC01356Q8N9X3 169 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 GATD1Q8NB37 220 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 FAM159AQ6UWV7 190 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 MAPK1IP1LQ8NDC0 245 aa11.57□□□□□ -0.56
PHTF1-202ENST00000369598 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 SNCGO76070 127 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 Q1RN00 199 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 DEFB113Q30KQ7 82 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 IGKV3D-20A0A0C4DH25 116 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 F8VRH5 84 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 FANCD2OSQ96PS1 177 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 CSMD2Q7Z408 3487 aa11.56□□□□□ -0.56
PHTF1-202ENST00000369598 IGLV11-55A0A075B6I3 123 aa11.55□□□□□ -0.56
PHTF1-202ENST00000369598 J3QKU1 62 aa11.55□□□□□ -0.56
PHTF1-202ENST00000369598 RPL32P62910 135 aaKnown RBP11.55□□□□□ -0.56
PHTF1-202ENST00000369598 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms