RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RPL7P18124 248 aaKnown RBP8.16□□□□□ -1.1
TPM3-212ENST00000368533 SPATA25Q9BR10 227 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 NDFIP1Q9BT67 221 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 WI2-2373I1.2A0A1W2PRP0 233 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 ORM1P02763 201 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 KHDC1LQ5JSQ8 128 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 LYPD1Q8N2G4 141 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 GLMPQ8WWB7 406 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 A0A096LNJ9 63 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 IGHG2P01859 326 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 UNQ9165/PRO28630Q6UXU0 137 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 J3QLI3 93 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 SH2D1AO60880 128 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 SRD5A1P18405 259 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 SYT8Q8NBV8 401 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 EEF1AKMT3Q96AZ1 226 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 DUX3Q96PT4 197 aa8.15□□□□□ -1.1
TPM3-212ENST00000368533 B5MCH6 92 aa8.15□□□□□ -1.11
TPM3-212ENST00000368533 J3QR89 54 aa8.15□□□□□ -1.11
TPM3-212ENST00000368533 TWIST1Q15672 202 aa8.15□□□□□ -1.11
TPM3-212ENST00000368533 D6R8Y8 96 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 ARL3P36405 182 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 VPREB3Q9UKI3 123 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 A0A1B0GWB2 263 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 FCER1GP30273 86 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 TCTEX1D4Q5JR98 221 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 C18orf65Q6ZTR6 163 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 RNF182Q8N6D2 247 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 SMKR1H3BMG3 65 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
TPM3-212ENST00000368533 HERV-K104P63124 156 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 FHL3Q13643 280 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 Q6YL49 198 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 FOXI2Q6ZQN5 318 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 PRELID3AQ96N28 172 aa8.14□□□□□ -1.11
TPM3-212ENST00000368533 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
TPM3-212ENST00000368533 MRPS12O15235 138 aaKnown RBP8.13□□□□□ -1.11
TPM3-212ENST00000368533 DEFB1P60022 68 aa8.13□□□□□ -1.11
TPM3-212ENST00000368533 ERCC8Q13216 396 aa8.13□□□□□ -1.11
TPM3-212ENST00000368533 PDE6HQ13956 83 aa8.13□□□□□ -1.11
TPM3-212ENST00000368533 CKS2P33552 79 aa8.13□□□□□ -1.11
TPM3-212ENST00000368533 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
TPM3-212ENST00000368533 OR9G4Q8NGQ1 327 aa8.13□□□□□ -1.11
TPM3-212ENST00000368533 F8P00451 2351 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 PTH2Q96A98 100 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 PRR25Q96S07 402 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 IGF1P05019 195 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 XGP55808 180 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 Q6AWC8 147 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
TPM3-212ENST00000368533 FSHBP01225 129 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 KRTAP1-1Q07627 177 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 GTSCR1Q86UQ5 136 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 CHAC1Q9BUX1 264 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 ESM1Q9NQ30 184 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
TPM3-212ENST00000368533 TRBV6-1A0A0K0K1D8 114 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 A0A1B0GW15 77 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 A0A1W2PRX2 142 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 IGLL5B9A064 214 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 APOMO95445 188 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 C19orf54Q5BKX5 351 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 SIGLEC8Q9NYZ4 499 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 UFC1Q9Y3C8 167 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 CLPSL1A2RUU4 121 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 F8W1H4 67 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 TSPAN13O95857 204 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
TPM3-212ENST00000368533 SMAD5-AS1Q9Y6J3 95 aa8.11□□□□□ -1.11
TPM3-212ENST00000368533 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 ZNF702PQ9H963 129 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
TPM3-212ENST00000368533 TRBV7-1A0A0A6YYK4 115 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 A6NJY4 79 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 J3KRW8 73 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
TPM3-212ENST00000368533 SMIM20Q8N5G0 67 aa8.1□□□□□ -1.11
TPM3-212ENST00000368533 ZNF418Q8TF45 676 aaPredicted RBP8.1□□□□□ -1.11
TPM3-212ENST00000368533 DNAJC9-AS1A6NH13 148 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 BAHCC1Q9P281 2608 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 ANAPC13Q9BS18 74 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 PRSS29PA6NIE9 313 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 E9PLD3 99 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 METTL26Q96S19 204 aa8.09□□□□□ -1.11
TPM3-212ENST00000368533 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms