RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MRAP2Q96G30 205 aa8.81□□□□□ -1
USF1-201ENST00000368019 A0A087WX48 190 aa8.8□□□□□ -1
USF1-201ENST00000368019 A0A1B0GWB2 263 aa8.8□□□□□ -1
USF1-201ENST00000368019 LINC01549A6NIU2 74 aa8.8□□□□□ -1
USF1-201ENST00000368019 PLNP26678 52 aa8.8□□□□□ -1
USF1-201ENST00000368019 FOXI2Q6ZQN5 318 aa8.8□□□□□ -1
USF1-201ENST00000368019 MYOZ3Q8TDC0 251 aa8.8□□□□□ -1
USF1-201ENST00000368019 ZFAND3Q9H8U3 227 aa8.8□□□□□ -1
USF1-201ENST00000368019 ONECUT1Q9UBC0 465 aa8.8□□□□□ -1
USF1-201ENST00000368019 PRKDCP78527 4128 aaKnown RBP8.79□□□□□ -1
USF1-201ENST00000368019 SMKR1H3BMG3 65 aa8.79□□□□□ -1
USF1-201ENST00000368019 ORM1P02763 201 aa8.79□□□□□ -1
USF1-201ENST00000368019 PRSS1P07477 247 aa8.79□□□□□ -1
USF1-201ENST00000368019 MED14OSP0DP75 135 aa8.79□□□□□ -1
USF1-201ENST00000368019 GCSHP23434 173 aa8.79□□□□□ -1
USF1-201ENST00000368019 FXYD2P54710 66 aa8.79□□□□□ -1
USF1-201ENST00000368019 LAGE3Q14657 143 aa8.79□□□□□ -1
USF1-201ENST00000368019 ZNF502Q8TBZ5 544 aa8.79□□□□□ -1
USF1-201ENST00000368019 IGHV3OR16-10A0A075B7F0 116 aa8.78□□□□□ -1
USF1-201ENST00000368019 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
USF1-201ENST00000368019 BUB3O43684 328 aa8.78□□□□□ -1
USF1-201ENST00000368019 CIDEAO60543 219 aa8.78□□□□□ -1
USF1-201ENST00000368019 ZC2HC1BQ5TFG8 222 aa8.78□□□□□ -1
USF1-201ENST00000368019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
USF1-201ENST00000368019 C9orf47Q6ZRZ4 202 aa8.78□□□□□ -1
USF1-201ENST00000368019 DYNAPQ8N1N2 210 aa8.78□□□□□ -1
USF1-201ENST00000368019 NRACQ8N912 160 aa8.78□□□□□ -1
USF1-201ENST00000368019 RAB37Q96AX2 223 aa8.78□□□□□ -1
USF1-201ENST00000368019 PLXNB1O43157 2135 aa8.78□□□□□ -1
USF1-201ENST00000368019 TRAV40A0A0B4J280 105 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 IGKV3D-20A0A0C4DH25 116 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 IGHV7-4-1A0A0J9YVY3 117 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 CENPVL3A0A0U1RRI6 287 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 IGLL5B9A064 214 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 F8VRH5 84 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 M0R381 172 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 NDPQ00604 133 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 DEFB112Q30KQ8 113 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 ORMDL2Q53FV1 153 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 Q8TAT8 98 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 U3KQE9 123 aa8.77□□□□□ -1.01
USF1-201ENST00000368019 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 IGHV7-81A0A0B4J1V7 117 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 A0A1W2PRD5 423 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 A0A1W2PRF3 423 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 A0A1W2PRM7 423 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 NCBP2LA6PVI3 153 aaKnown RBP8.76□□□□□ -1.01
USF1-201ENST00000368019 HOXA3O43365 443 aaPredicted RBP8.76□□□□□ -1.01
USF1-201ENST00000368019 PPP1R17O96001 155 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 DLX1P56177 255 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 HES1Q14469 280 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 Q6YL49 198 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 VMO1Q7Z5L0 202 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 WFDC12Q8WWY7 111 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 ZNF479Q96JC4 524 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 SPATA25Q9BR10 227 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 C20orf78Q9BR46 151 aa8.76□□□□□ -1.01
USF1-201ENST00000368019 H7C1H1 209 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 RPL32P62910 135 aaKnown RBP8.75□□□□□ -1.01
USF1-201ENST00000368019 C12orf74Q32Q52 190 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 TMEM78Q5T7P6 136 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 SAMD13Q5VXD3 122 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 BRD3OSQ6XYD6 125 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 ATP6V0E2Q8NHE4 81 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 CITED1Q99966 193 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 SMIM2Q9BVW6 85 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 SPANXB1Q9NS25 103 aaPredicted RBP8.75□□□□□ -1.01
USF1-201ENST00000368019 MSRB1Q9NZV6 116 aa8.75□□□□□ -1.01
USF1-201ENST00000368019 TRBV7-1A0A0A6YYK4 115 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 TRBV7-9A0A0J9YWB2 115 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.74□□□□□ -1.01
USF1-201ENST00000368019 NDUFA7O95182 113 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 TMEM11P17152 192 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 FXYD7P58549 80 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 RRN3P1Q2M238 152 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 CD300EQ496F6 205 aaPredicted RBP8.74□□□□□ -1.01
USF1-201ENST00000368019 LCNL1Q6ZST4 164 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 GTSCR1Q86UQ5 136 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 TMEM86BQ8N661 226 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 Q8N9W7 124 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 AGPAT4-IT1Q9H0P7 198 aa8.74□□□□□ -1.01
USF1-201ENST00000368019 NHP2Q9NX24 153 aaKnown RBP8.74□□□□□ -1.01
USF1-201ENST00000368019 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
USF1-201ENST00000368019 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 KRTAP10-3P60369 221 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 ERCC8Q13216 396 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 PAPPA-AS1Q5QFB9 102 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 EEF1AKMT3Q96AZ1 226 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 METTL26Q96S19 204 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 SIGMAR1Q99720 223 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 NAA38Q9BRA0 125 aaKnown RBP8.73□□□□□ -1.01
USF1-201ENST00000368019 S4R3C0 116 aa8.73□□□□□ -1.01
USF1-201ENST00000368019 TRAV8-2A0A0B4J237 113 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 TMEM238LA0A1B0GVL6 79 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 CLPSL1A2RUU4 121 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 A6NJY4 79 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms