RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 AZU1P20160 251 aa14.91□□□□□ -0.02
SHISA4-201ENST00000362011 ELOBQ15370 118 aa14.91□□□□□ -0.02
SHISA4-201ENST00000362011 TMEM263Q8WUH6 116 aaKnown RBP14.91□□□□□ -0.02
SHISA4-201ENST00000362011 C16orf74Q96GX8 76 aa14.91□□□□□ -0.02
SHISA4-201ENST00000362011 BTF3L4Q96K17 158 aa14.91□□□□□ -0.02
SHISA4-201ENST00000362011 SSBP4Q9BWG4 385 aaPredicted RBP14.91□□□□□ -0.02
SHISA4-201ENST00000362011 MDFICQ9P1T7 246 aa14.91□□□□□ -0.02
SHISA4-201ENST00000362011 SPRY2O43597 315 aa14.9□□□□□ -0.02
SHISA4-201ENST00000362011 RNASE8Q8TDE3 154 aaKnown RBP14.9□□□□□ -0.02
SHISA4-201ENST00000362011 C9orf85Q96MD7 179 aa14.9□□□□□ -0.02
SHISA4-201ENST00000362011 TP53TG1Q9Y2A0 90 aa14.9□□□□□ -0.02
SHISA4-201ENST00000362011 X6R8D5 127 aa14.9□□□□□ -0.02
SHISA4-201ENST00000362011 SPINK4O60575 86 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 ZNF493Q6ZR52 646 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 C11orf72Q8NBR9 251 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 OR11H2Q8NH07 326 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 YPEL4Q96NS1 127 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 SCRT2Q9NQ03 307 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 PHLDA3Q9Y5J5 127 aa14.89□□□□□ -0.03
SHISA4-201ENST00000362011 A0A1B0GUT8 65 aa14.88□□□□□ -0.03
SHISA4-201ENST00000362011 CACNG7P62955 275 aa14.88□□□□□ -0.03
SHISA4-201ENST00000362011 GSN-AS1Q9NRJ2 163 aa14.88□□□□□ -0.03
SHISA4-201ENST00000362011 TRBV24-1A0A075B6N3 115 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 TGIF2-C20orf24A0A0A6YYL0 155 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 SNURFLB1AK76 121 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 NHLRC4P0CG21 123 aaPredicted RBP14.87□□□□□ -0.03
SHISA4-201ENST00000362011 RIGQ13278 110 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 MRPL54Q6P161 138 aaKnown RBP14.87□□□□□ -0.03
SHISA4-201ENST00000362011 WDR73Q6P4I2 378 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 OR10AG1Q8NH19 301 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 SPXQ9BT56 116 aa14.87□□□□□ -0.03
SHISA4-201ENST00000362011 MUC21A0A0G2JKD1 596 aa14.86□□□□□ -0.03
SHISA4-201ENST00000362011 MUC21A0A140T8X8 626 aa14.86□□□□□ -0.03
SHISA4-201ENST00000362011 SPANXN1Q5VSR9 72 aa14.86□□□□□ -0.03
SHISA4-201ENST00000362011 ATP5L2Q7Z4Y8 100 aa14.86□□□□□ -0.03
SHISA4-201ENST00000362011 CNFNQ9BYD5 112 aa14.86□□□□□ -0.03
SHISA4-201ENST00000362011 MIFP14174 115 aa14.85□□□□□ -0.03
SHISA4-201ENST00000362011 SBSPONQ8IVN8 264 aa14.85□□□□□ -0.03
SHISA4-201ENST00000362011 ZFP82Q8N141 532 aa14.85□□□□□ -0.03
SHISA4-201ENST00000362011 IL17DQ8TAD2 202 aa14.85□□□□□ -0.03
SHISA4-201ENST00000362011 OVOL2Q9BRP0 275 aa14.85□□□□□ -0.03
SHISA4-201ENST00000362011 NACAE9PAV3 2078 aa14.85□□□□□ -0.03
SHISA4-201ENST00000362011 SSTP61278 116 aa14.84□□□□□ -0.03
SHISA4-201ENST00000362011 SYT8Q8NBV8 401 aa14.84□□□□□ -0.03
SHISA4-201ENST00000362011 RETNQ9HD89 108 aa14.84□□□□□ -0.03
SHISA4-201ENST00000362011 IGHV4-4A0A075B6R2 117 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 A0A1B0GW15 77 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 A0A1B0GXF2 115 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 M0R2P5 195 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 M0R381 172 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 NTF3P20783 257 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 HBBP68871 147 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 FAM210BQ96KR6 192 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 U3KQK5 164 aa14.83□□□□□ -0.04
SHISA4-201ENST00000362011 PLAC8L1A1L4L8 177 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 COLCA2A8K830 154 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 NXPH4O95158 308 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 S100A8P05109 93 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 TWIST1Q15672 202 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 RASL11AQ6T310 242 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 PTH2Q96A98 100 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 SPATA25Q9BR10 227 aa14.82□□□□□ -0.04
SHISA4-201ENST00000362011 DYNC2H1Q8NCM8 4307 aaKnown RBP14.81□□□□□ -0.04
SHISA4-201ENST00000362011 IGHV4-28A0A0C4DH34 117 aa14.81□□□□□ -0.04
SHISA4-201ENST00000362011 DAZ2Q13117 558 aaKnown RBP14.81□□□□□ -0.04
SHISA4-201ENST00000362011 Q8NAQ8 132 aa14.81□□□□□ -0.04
SHISA4-201ENST00000362011 TM2D3Q9BRN9 247 aa14.81□□□□□ -0.04
SHISA4-201ENST00000362011 CAMPP49913 170 aa14.8□□□□□ -0.04
SHISA4-201ENST00000362011 COX19Q49B96 90 aa14.8□□□□□ -0.04
SHISA4-201ENST00000362011 DMRTA1Q5VZB9 504 aa14.8□□□□□ -0.04
SHISA4-201ENST00000362011 NOP10Q9NPE3 64 aaKnown RBP14.8□□□□□ -0.04
SHISA4-201ENST00000362011 MSRB1Q9NZV6 116 aa14.8□□□□□ -0.04
SHISA4-201ENST00000362011 RYR2Q92736 4967 aa14.79□□□□□ -0.04
SHISA4-201ENST00000362011 C3orf84H3BNL1 204 aa14.79□□□□□ -0.04
SHISA4-201ENST00000362011 TRGC1P0CF51 173 aa14.79□□□□□ -0.04
SHISA4-201ENST00000362011 ZNF876PQ49A33 203 aa14.79□□□□□ -0.04
SHISA4-201ENST00000362011 EMP1P54849 157 aa14.78□□□□□ -0.04
SHISA4-201ENST00000362011 PIK3CD-AS1Q5SR53 167 aa14.78□□□□□ -0.04
SHISA4-201ENST00000362011 SMIM15Q7Z3B0 74 aa14.78□□□□□ -0.04
SHISA4-201ENST00000362011 GATD1Q8NB37 220 aa14.78□□□□□ -0.04
SHISA4-201ENST00000362011 MRPL16Q9NX20 251 aaKnown RBP14.78□□□□□ -0.04
SHISA4-201ENST00000362011 TRGV1A0A0A0MS02 117 aa14.77□□□□□ -0.04
SHISA4-201ENST00000362011 RAB4BP61018 213 aa14.77□□□□□ -0.04
SHISA4-201ENST00000362011 LGALS9BQ3B8N2 356 aa14.77□□□□□ -0.04
SHISA4-201ENST00000362011 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.77□□□□□ -0.04
SHISA4-201ENST00000362011 AP1S3Q96PC3 154 aa14.77□□□□□ -0.04
SHISA4-201ENST00000362011 NDUFAF3Q9BU61 184 aa14.77□□□□□ -0.04
SHISA4-201ENST00000362011 STAB2Q8WWQ8 2551 aa14.77□□□□□ -0.04
SHISA4-201ENST00000362011 HUWE1Q7Z6Z7 4374 aaKnown RBP14.76□□□□□ -0.05
SHISA4-201ENST00000362011 RAB5AP20339 215 aa14.76□□□□□ -0.05
SHISA4-201ENST00000362011 TMEM136Q6ZRR5 245 aa14.76□□□□□ -0.05
SHISA4-201ENST00000362011 RASL10AQ92737 203 aa14.76□□□□□ -0.05
SHISA4-201ENST00000362011 GNB1LQ9BYB4 327 aa14.76□□□□□ -0.05
SHISA4-201ENST00000362011 ZMAT4Q9H898 229 aa14.76□□□□□ -0.05
SHISA4-201ENST00000362011 SACSQ9NZJ4 4579 aa14.75□□□□□ -0.05
SHISA4-201ENST00000362011 DEFB4AO15263 64 aa14.75□□□□□ -0.05
SHISA4-201ENST00000362011 Q6ZTI0 123 aa14.75□□□□□ -0.05
SHISA4-201ENST00000362011 TMEM191AQ9H0A3 160 aa14.75□□□□□ -0.05
SHISA4-201ENST00000362011 LYRM9A8MSI8 78 aa14.74□□□□□ -0.05
SHISA4-201ENST00000362011 A8MWV9 139 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms