RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SPATA25Q9BR10 227 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 MALRD1Q5VYJ5 2156 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 MPV17L2Q567V2 206 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 MORN5Q5VZ52 161 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 C20orf144Q9BQM9 153 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 ESM1Q9NQ30 184 aa8.55□□□□□ -1.04
CLIP1-203ENST00000361654 EGR2P11161 476 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-203ENST00000361654 RNASE13Q5GAN3 156 aaKnown RBP8.54□□□□□ -1.04
CLIP1-203ENST00000361654 ZSWIM8A7E2V4 1837 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 Q9H8V8 135 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 TANC1Q9C0D5 1861 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 CHKB-CPT1BH3BT56 60 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 FGF6P10767 208 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 C18orf32Q8TCD1 76 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 CXCL5P42830 114 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
CLIP1-203ENST00000361654 BDP1A6H8Y1 2624 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 PTPRDP23468 1912 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 TICRRQ7Z2Z1 1910 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 LGALS9BQ3B8N2 356 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 LGALS9CQ6DKI2 356 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 IGFBPL1Q8WX77 278 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 NPYP01303 97 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 IL15RAQ13261 267 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
CLIP1-203ENST00000361654 IGHG2P01859 326 aa8.52□□□□□ -1.04
CLIP1-203ENST00000361654 Q8N9W7 124 aa8.52□□□□□ -1.04
CLIP1-203ENST00000361654 CITED1Q99966 193 aa8.52□□□□□ -1.04
CLIP1-203ENST00000361654 MRPL35Q9NZE8 188 aaKnown RBP8.52□□□□□ -1.04
CLIP1-203ENST00000361654 IGLV11-55A0A075B6I3 123 aa8.52□□□□□ -1.05
CLIP1-203ENST00000361654 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
CLIP1-203ENST00000361654 KIAA1671Q9BY89 1806 aa8.52□□□□□ -1.05
CLIP1-203ENST00000361654 C9orf47Q6ZRZ4 202 aa8.52□□□□□ -1.05
CLIP1-203ENST00000361654 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
CLIP1-203ENST00000361654 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 ZGRF1Q86YA3 2104 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 PHF3Q92576 2039 aaKnown RBP8.51□□□□□ -1.05
CLIP1-203ENST00000361654 GTF3C1Q12789 2109 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 LTAP01374 205 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 C11orf53Q8IXP5 236 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 KLK12Q9UKR0 248 aa8.51□□□□□ -1.05
CLIP1-203ENST00000361654 COL4A6Q14031 1691 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 TRBV7-3A0A075B6L6 115 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 SMIM27A0A1W2PRY6 76 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PRSS47A8MTI9 375 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 INAFM1C9JVW0 142 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 TNFRSF13BO14836 293 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-203ENST00000361654 RLFQ13129 1914 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 FNDC1Q4ZHG4 1894 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PCNX2A6NKB5 2137 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 C1orf147Q96MC9 270 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-203ENST00000361654 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 DEFB4AO15263 64 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 CYYR1Q96J86 154 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PLCE1Q9P212 2302 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 IFITM1P13164 125 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PRR20EP86478 221 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PRR20CP86479 221 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PRR20DP86480 221 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PRR20BP86481 221 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 PRR20AP86496 221 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 CARD19Q96LW7 228 aa8.5□□□□□ -1.05
CLIP1-203ENST00000361654 H0YGX0 51 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 RSPO1Q2MKA7 263 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-203ENST00000361654 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 CTSGP08311 255 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 C11orf52Q96A22 123 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 VSIG2Q96IQ7 327 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 WIPF3A6NGB9 483 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 TRACP01848 142 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
CLIP1-203ENST00000361654 I3L2K1 104 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
CLIP1-203ENST00000361654 C17orf77Q96MU5 243 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 V9GYV3 84 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 A6NDX4 124 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 K7EIM0 57 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 LINC01545Q5VT33 79 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 MP68P56378 58 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 SIRPDQ9H106 197 aa8.48□□□□□ -1.05
CLIP1-203ENST00000361654 PLXNA3P51805 1871 aa8.47□□□□□ -1.05
CLIP1-203ENST00000361654 SND1-IT1Q9HBX3 110 aa8.47□□□□□ -1.05
CLIP1-203ENST00000361654 IGLV3-1P01715 115 aa8.47□□□□□ -1.05
CLIP1-203ENST00000361654 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
CLIP1-203ENST00000361654 DEFB125Q8N687 156 aa8.47□□□□□ -1.05
CLIP1-203ENST00000361654 ZNF726P1Q15940 193 aa8.46□□□□□ -1.05
CLIP1-203ENST00000361654 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 436 ms