RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 U3KQE9 123 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 PIEZO2Q9H5I5 2752 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 ZNF134P52741 427 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 ABCA2Q9BZC7 2435 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 RAI1Q7Z5J4 1906 aaPredicted RBP6.96□□□□□ -1.3
COL6A6-201ENST00000358511 F6UB75 175 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 C17orf77Q96MU5 243 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 SPATA12Q7Z6I5 190 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 RNF183Q96D59 192 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 IGHV1-69DA0A0B4J2H0 117 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 RS1O15537 224 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 PFN2P35080 140 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 HERV-K104P63124 156 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.95□□□□□ -1.3
COL6A6-201ENST00000358511 ZFP36L1Q07352 338 aaKnown RBP6.95□□□□□ -1.3
COL6A6-201ENST00000358511 CASC2Q6XLA1 102 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 V9GYY9 64 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 SETD2Q9BYW2 2564 aaPredicted RBP6.95□□□□□ -1.3
COL6A6-201ENST00000358511 H3BT86 120 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 C17orf58Q2M2W7 97 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 CRIPAKQ8N1N5 446 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 RMI2Q96E14 147 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
COL6A6-201ENST00000358511 Q71RC1 249 aaPredicted RBP6.94□□□□□ -1.3
COL6A6-201ENST00000358511 A4D1N5 150 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 SPTSSBQ8NFR3 76 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 LYNX1G3V0Z9 82 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 LYNX1P0DP58 116 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 C17orf82Q86X59 251 aaPredicted RBP6.94□□□□□ -1.3
COL6A6-201ENST00000358511 ODF1Q14990 250 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 ZNF672Q499Z4 452 aaPredicted RBP6.94□□□□□ -1.3
COL6A6-201ENST00000358511 LINC01620Q4KN68 170 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 TEX36Q5VZQ5 186 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 WDR86Q86TI4 376 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 DUX4L9Q6RFH8 374 aaPredicted RBP6.94□□□□□ -1.3
COL6A6-201ENST00000358511 FAM110DQ8TAY7 271 aaPredicted RBP6.94□□□□□ -1.3
COL6A6-201ENST00000358511 MSRB2Q9Y3D2 182 aa6.94□□□□□ -1.3
COL6A6-201ENST00000358511 Q8TCH9 128 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 GTSF1Q8WW33 167 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 SPANXB1Q9NS25 103 aaPredicted RBP6.93□□□□□ -1.3
COL6A6-201ENST00000358511 ZNRD1Q9P1U0 126 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 MP68P56378 58 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 LINC00311Q8N616 119 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 IGHV1OR15-1A0A075B7D0 117 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 LGALS9O00182 355 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 UQCRQO14949 82 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 ARTNQ5T4W7 220 aa6.93□□□□□ -1.3
COL6A6-201ENST00000358511 TRBV10-2A0A0K0K1G8 114 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 C2orf70A6NJV1 201 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 MT-ATP8P03928 68 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 DAD1P61803 113 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 PIFOQ8TCI5 191 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 CRYGBP07316 175 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 GP9P14770 177 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 Q9H8V8 135 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 IGHV4-28A0A0C4DH34 117 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 Q0VFX4 171 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 RSPO1Q2MKA7 263 aaPredicted RBP6.92□□□□□ -1.3
COL6A6-201ENST00000358511 RNF114Q9Y508 228 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 MUC6Q6W4X9 2439 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 TLN1Q9Y490 2541 aaKnown RBP6.92□□□□□ -1.3
COL6A6-201ENST00000358511 E9PLD3 99 aa6.92□□□□□ -1.3
COL6A6-201ENST00000358511 H0YGX0 51 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 H3BQ85 93 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 CTRLP40313 264 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 CFHR3Q02985 330 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 DYNAPQ8N1N2 210 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 SLC25A29Q8N8R3 303 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 PSMB8P28062 276 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 SAA4P35542 130 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
COL6A6-201ENST00000358511 RNF166Q96A37 237 aaPredicted RBP6.91□□□□□ -1.3
COL6A6-201ENST00000358511 KLK9Q9UKQ9 250 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 LYPD2Q6UXB3 125 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
COL6A6-201ENST00000358511 PRRC2CQ9Y520 2896 aaKnown RBP6.91□□□□□ -1.3
COL6A6-201ENST00000358511 RPL18AQ02543 176 aaKnown RBP6.91□□□□□ -1.3
COL6A6-201ENST00000358511 ATP6V0E1O15342 81 aa6.9□□□□□ -1.3
COL6A6-201ENST00000358511 OVOL3O00110 214 aa6.9□□□□□ -1.3
COL6A6-201ENST00000358511 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.3
COL6A6-201ENST00000358511 TCL1BO95988 128 aa6.9□□□□□ -1.3
COL6A6-201ENST00000358511 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
COL6A6-201ENST00000358511 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
COL6A6-201ENST00000358511 KLHL30-AS1Q8NEE0 82 aa6.9□□□□□ -1.31
COL6A6-201ENST00000358511 NDUFA4O00483 81 aa6.9□□□□□ -1.31
COL6A6-201ENST00000358511 ZFP2Q6ZN57 461 aa6.9□□□□□ -1.31
COL6A6-201ENST00000358511 LINC00643Q86TS7 51 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 FAM167A-AS1Q96KT0 104 aa6.89□□□□□ -1.31
COL6A6-201ENST00000358511 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
COL6A6-201ENST00000358511 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
COL6A6-201ENST00000358511 MBD3L5A6NJ08 208 aaPredicted RBP6.89□□□□□ -1.31
COL6A6-201ENST00000358511 RNASE13Q5GAN3 156 aaKnown RBP6.89□□□□□ -1.31
COL6A6-201ENST00000358511 MBD3L2Q8NHZ7 208 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms