RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 IGHV4OR15-8A0A075B7B6 117 aa8.69□□□□□ -1.02
GTF3C1-201ENST00000356183 A0A087WW49 117 aa8.69□□□□□ -1.02
GTF3C1-201ENST00000356183 NDUFB1O75438 58 aa8.69□□□□□ -1.02
GTF3C1-201ENST00000356183 TIRAPP58753 221 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 CACNA1GO43497 2377 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV1-69DA0A0B4J2H0 117 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV1-69P01742 117 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 TEN1Q86WV5 123 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 ZNF503Q96F45 646 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 K7EM74 188 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 SRSF2Q01130 221 aaKnown RBP8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 HIST2H2BCQ6DN03 193 aa8.68□□□□□ -1.02
GTF3C1-201ENST00000356183 PLXND1Q9Y4D7 1925 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 PKDREJQ9NTG1 2253 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 ANAPC1Q9H1A4 1944 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 MSMBP08118 114 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV3-30-3P0DP02 117 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 NPBQ8NG41 125 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 SHANK1Q9Y566 2161 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
GTF3C1-201ENST00000356183 PLXNA3P51805 1871 aa8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 DENND4AQ7Z401 1863 aa8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 H0Y9J4 135 aa8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 SEM1Q6ZVN7 128 aa8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 CAMK2N2Q96S95 79 aa8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 APRG1Q8IVJ8 170 aa8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-201ENST00000356183 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.02
GTF3C1-201ENST00000356183 PTH2Q96A98 100 aa8.65□□□□□ -1.02
GTF3C1-201ENST00000356183 Q96MF0 132 aa8.65□□□□□ -1.02
GTF3C1-201ENST00000356183 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.02
GTF3C1-201ENST00000356183 H0YGX0 51 aa8.65□□□□□ -1.02
GTF3C1-201ENST00000356183 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
GTF3C1-201ENST00000356183 LINC01545Q5VT33 79 aa8.65□□□□□ -1.03
GTF3C1-201ENST00000356183 TTTY13Q9BZ97 58 aa8.65□□□□□ -1.03
GTF3C1-201ENST00000356183 K7EQD1 137 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 LECT2O14960 151 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 FAM110AQ9BQ89 295 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 CD59P13987 128 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 WI2-2373I1.2A0A1W2PRP0 233 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 COX7A2LO14548 114 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 IGKV4-1P06312 121 aa8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 TNRC6AQ8NDV7 1962 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 SPTAN1Q13813 2472 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-201ENST00000356183 TRBV12-3P01733 135 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 C15orf65H3BRN8 121 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 LMO1P25800 156 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 WISP1O95388 367 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 IGLV3-1P01715 115 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 UBE2AP49459 152 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 PRR20EP86478 221 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 PRR20CP86479 221 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 PRR20DP86480 221 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 PRR20BP86481 221 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 PRR20AP86496 221 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 NOTCH4Q99466 2003 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 GYPEP15421 78 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 ZNF491Q8N8L2 437 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 MRPL36Q9P0J6 103 aaKnown RBP8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 V9GYY9 64 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 NCKAP5O14513 1909 aa8.63□□□□□ -1.03
GTF3C1-201ENST00000356183 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 Q6ZR03 302 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 ZNF524Q96C55 264 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 ZGRF1Q86YA3 2104 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 SDIM1Q6ZPB5 146 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 Q6ZUT4 128 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 Q8NFD4 153 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 MSRB1Q9NZV6 116 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 TICRRQ7Z2Z1 1910 aa8.62□□□□□ -1.03
GTF3C1-201ENST00000356183 DEFB136Q30KP8 78 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 PRR30Q53SZ7 412 aaPredicted RBP8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 IGLV3-9A0A075B6K5 115 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 HOXB4P17483 251 aaPredicted RBP8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 C17orf82Q86X59 251 aaPredicted RBP8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 ZNF503-AS2A6NEH8 195 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 NDUFV3P56181 108 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 Q8TCH9 128 aa8.61□□□□□ -1.03
GTF3C1-201ENST00000356183 H3BQ85 93 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 NOTCH3Q9UM47 2321 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 LOXP28300 417 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 RSPO1Q2MKA7 263 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 TCL1BO95988 128 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 NFE4Q86UQ8 179 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms