RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 ARL3P36405 182 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 C5orf56Q8N8D9 126 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 PTH2Q96A98 100 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 HHLA3Q9XRX5 114 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 A0A1B0GWB2 263 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 GNRH2O43555 120 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 FAM110DQ8TAY7 271 aaPredicted RBP10.53□□□□□ -0.72
EBF3-201ENST00000355311 RNF185Q96GF1 192 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 IGLL5B9A064 214 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 RNASE4P34096 147 aaKnown RBP10.52□□□□□ -0.73
EBF3-201ENST00000355311 PDE6HQ13956 83 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 TMEM158Q8WZ71 300 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 FOXC2Q99958 501 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 TGFAP01135 160 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 EMP1P54849 157 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 PAX8Q06710 450 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 MINOS1Q5TGZ0 78 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 MINOS1-NBL1R4GNA1 71 aa10.52□□□□□ -0.73
EBF3-201ENST00000355311 MGPP08493 103 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 UCNP55089 124 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 FOXI2Q6ZQN5 318 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 C14orf178Q8N769 122 aaPredicted RBP10.51□□□□□ -0.73
EBF3-201ENST00000355311 SYT8Q8NBV8 401 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 EEF1AKMT3Q96AZ1 226 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 JPT2Q9H910 190 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 FN1P02751 2386 aaKnown RBP10.51□□□□□ -0.73
EBF3-201ENST00000355311 MT-ATP8P03928 68 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
EBF3-201ENST00000355311 PIFOQ8TCI5 191 aa10.51□□□□□ -0.73
EBF3-201ENST00000355311 FHL3Q13643 280 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 CCL19Q99731 98 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 TMEM8BA6NDV4 472 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 PRM2P04554 102 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 EBI3Q14213 229 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 ODF1Q14990 250 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 CEND1Q8N111 149 aa10.5□□□□□ -0.73
EBF3-201ENST00000355311 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
EBF3-201ENST00000355311 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
EBF3-201ENST00000355311 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
EBF3-201ENST00000355311 SPATA25Q9BR10 227 aa10.49□□□□□ -0.73
EBF3-201ENST00000355311 FLNAP21333 2647 aaKnown RBP10.49□□□□□ -0.73
EBF3-201ENST00000355311 TRAV12-2A0A075B6T6 113 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 TMEM238LA0A1B0GVL6 79 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 E9PLD3 99 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 SIVA1O15304 175 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 ZNF418Q8TF45 676 aaPredicted RBP10.48□□□□□ -0.73
EBF3-201ENST00000355311 HIST1H4GQ99525 98 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 APOMO95445 188 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 DPF1Q92782 380 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 MAP1LC3AQ9H492 121 aa10.48□□□□□ -0.73
EBF3-201ENST00000355311 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
EBF3-201ENST00000355311 J3QR89 54 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 MUC4Q99102 2169 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 F8W1H4 67 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 ZNF493Q6ZR52 646 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 IGHV1-69DA0A0B4J2H0 117 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 SCGB2A1O75556 95 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 IGHV1-69P01742 117 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 IGKCP01834 107 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 C1orf122Q6ZSJ8 110 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 RNF183Q96D59 192 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 CYSLTR1Q9Y271 337 aa10.47□□□□□ -0.73
EBF3-201ENST00000355311 DUX3Q96PT4 197 aa10.46□□□□□ -0.73
EBF3-201ENST00000355311 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.73
EBF3-201ENST00000355311 A0A087WWL8 130 aa10.46□□□□□ -0.74
EBF3-201ENST00000355311 SCGB1A1P11684 91 aa10.46□□□□□ -0.74
EBF3-201ENST00000355311 ITPR2Q14571 2701 aa10.46□□□□□ -0.74
EBF3-201ENST00000355311 APCP25054 2843 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 XGP55808 180 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 IGHV4-59P01825 116 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 Q6AWC8 147 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 MRAP2Q96G30 205 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 RHPN1-AS1Q9BWJ2 59 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 MOB4Q9Y3A3 225 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 HIVEP2P31629 2446 aa10.45□□□□□ -0.74
EBF3-201ENST00000355311 ITPR3Q14573 2671 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 LOC107984156A0A0G2JMH3 177 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 ZNF688P0C7X2 276 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 ZFP2Q6ZN57 461 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 ARL17AQ8IVW1 177 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 PRO0461Q9UI25 63 aa10.44□□□□□ -0.74
EBF3-201ENST00000355311 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
EBF3-201ENST00000355311 TRAV12-3A0A0B4J271 114 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 TRBV6-1A0A0K0K1D8 114 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 OOSP1A8MZH6 123 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 C11orf44Q8N8P7 122 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 F5H697 171 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms