RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 TMEM61Q8N0U2 210 aa13.79□□□□□ -0.2
TRIM41-202ENST00000351937 U3KQK5 164 aa13.79□□□□□ -0.2
TRIM41-202ENST00000351937 HINT1P49773 126 aaPredicted RBP13.78□□□□□ -0.2
TRIM41-202ENST00000351937 IGHV4-4A0A075B6R2 117 aa13.78□□□□□ -0.2
TRIM41-202ENST00000351937 CACNG7P62955 275 aa13.78□□□□□ -0.2
TRIM41-202ENST00000351937 ANXA2RQ3ZCQ2 193 aa13.78□□□□□ -0.2
TRIM41-202ENST00000351937 SPATA12Q7Z6I5 190 aa13.78□□□□□ -0.2
TRIM41-202ENST00000351937 CHCHD1Q96BP2 118 aaKnown RBP13.78□□□□□ -0.2
TRIM41-202ENST00000351937 PROK1P58294 105 aa13.77□□□□□ -0.2
TRIM41-202ENST00000351937 TP73-AS1Q9UF72 201 aa13.77□□□□□ -0.2
TRIM41-202ENST00000351937 IGHV1-24A0A0C4DH33 117 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 MRPL51Q4U2R6 128 aaKnown RBP13.77□□□□□ -0.21
TRIM41-202ENST00000351937 LINC00173Q6ZV60 143 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 OR10AG1Q8NH19 301 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 INAFM1C9JVW0 142 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 ASIPP42127 132 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 Q6ZN92 141 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 ORMDL3Q8N138 153 aa13.77□□□□□ -0.21
TRIM41-202ENST00000351937 D6R8Y8 96 aa13.76□□□□□ -0.21
TRIM41-202ENST00000351937 H3BVH4 76 aa13.76□□□□□ -0.21
TRIM41-202ENST00000351937 MED14OSP0DP75 135 aa13.76□□□□□ -0.21
TRIM41-202ENST00000351937 TSPOP30536 169 aa13.76□□□□□ -0.21
TRIM41-202ENST00000351937 SIGLEC8Q9NYZ4 499 aa13.76□□□□□ -0.21
TRIM41-202ENST00000351937 C7orf71A4D174 169 aa13.75□□□□□ -0.21
TRIM41-202ENST00000351937 IGLC3P0DOY3 106 aa13.75□□□□□ -0.21
TRIM41-202ENST00000351937 S100A4P26447 101 aaKnown RBP13.75□□□□□ -0.21
TRIM41-202ENST00000351937 SPANXN1Q5VSR9 72 aa13.75□□□□□ -0.21
TRIM41-202ENST00000351937 CDKN1BP46527 198 aa13.75□□□□□ -0.21
TRIM41-202ENST00000351937 CD300EQ496F6 205 aaPredicted RBP13.75□□□□□ -0.21
TRIM41-202ENST00000351937 TRAV25A0A0B4J276 109 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 IGKV3-20P01619 116 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 DEFB131AP59861 70 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 FAM159AQ6UWV7 190 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 SMIM15Q7Z3B0 74 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 RNF185Q96GF1 192 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 PRELID3AQ96N28 172 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 SPAG8Q99932 426 aaPredicted RBP13.74□□□□□ -0.21
TRIM41-202ENST00000351937 TMEM70Q9BUB7 260 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 CKS2P33552 79 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
TRIM41-202ENST00000351937 OR4C46A6NHA9 309 aa13.73□□□□□ -0.21
TRIM41-202ENST00000351937 PPBPP02775 128 aa13.73□□□□□ -0.21
TRIM41-202ENST00000351937 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
TRIM41-202ENST00000351937 TRAV12-3A0A0B4J271 114 aa13.73□□□□□ -0.21
TRIM41-202ENST00000351937 GNRH2O43555 120 aa13.72□□□□□ -0.21
TRIM41-202ENST00000351937 LEPROTL1O95214 131 aa13.72□□□□□ -0.21
TRIM41-202ENST00000351937 HNRNPA3P51991 378 aaKnown RBP13.72□□□□□ -0.21
TRIM41-202ENST00000351937 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
TRIM41-202ENST00000351937 UQCR10Q9UDW1 63 aa13.72□□□□□ -0.21
TRIM41-202ENST00000351937 HLA-DRB4P13762 266 aa13.72□□□□□ -0.21
TRIM41-202ENST00000351937 MRPL52Q86TS9 123 aaKnown RBP13.72□□□□□ -0.21
TRIM41-202ENST00000351937 HLA-DRB4X5D2U9 266 aa13.72□□□□□ -0.21
TRIM41-202ENST00000351937 TRAV9-2A0A087WT02 112 aa13.71□□□□□ -0.21
TRIM41-202ENST00000351937 CBY3A6NI87 242 aa13.71□□□□□ -0.21
TRIM41-202ENST00000351937 A8MTW9 85 aa13.71□□□□□ -0.21
TRIM41-202ENST00000351937 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.21
TRIM41-202ENST00000351937 TIMM8BQ9Y5J9 83 aaPredicted RBP13.71□□□□□ -0.21
TRIM41-202ENST00000351937 EVI2AP22794 236 aa13.71□□□□□ -0.22
TRIM41-202ENST00000351937 SPINK13Q1W4C9 94 aa13.71□□□□□ -0.22
TRIM41-202ENST00000351937 ZNF256Q9Y2P7 627 aaPredicted RBP13.71□□□□□ -0.22
TRIM41-202ENST00000351937 KNCNA6PVL3 124 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 ADARB2-AS1A8MUL3 147 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 SYS1-DBNDD2H3BUS1 97 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 RNASE3P12724 160 aaKnown RBP13.7□□□□□ -0.22
TRIM41-202ENST00000351937 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 H3BMM0 161 aa13.7□□□□□ -0.22
TRIM41-202ENST00000351937 CRXO43186 299 aaPredicted RBP13.7□□□□□ -0.22
TRIM41-202ENST00000351937 IGLL1P15814 213 aa13.69□□□□□ -0.22
TRIM41-202ENST00000351937 AP5S1Q9NUS5 200 aa13.69□□□□□ -0.22
TRIM41-202ENST00000351937 SMKR1H3BMG3 65 aa13.68□□□□□ -0.22
TRIM41-202ENST00000351937 UBE2V1Q13404 147 aa13.68□□□□□ -0.22
TRIM41-202ENST00000351937 FA2HQ7L5A8 372 aa13.68□□□□□ -0.22
TRIM41-202ENST00000351937 M0R381 172 aa13.68□□□□□ -0.22
TRIM41-202ENST00000351937 NCR2O95944 276 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 NPYP01303 97 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 CD7P09564 240 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 SETD2Q9BYW2 2564 aaPredicted RBP13.67□□□□□ -0.22
TRIM41-202ENST00000351937 CRLF1O75462 422 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 IFI27P40305 119 aaPredicted RBP13.67□□□□□ -0.22
TRIM41-202ENST00000351937 ORAOV1Q8WV07 137 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 MCRIP2Q9BUT9 160 aaKnown RBP13.67□□□□□ -0.22
TRIM41-202ENST00000351937 NDUFA11Q86Y39 141 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 COX11Q9Y6N1 276 aa13.67□□□□□ -0.22
TRIM41-202ENST00000351937 NSD1Q96L73 2696 aaPredicted RBP13.66□□□□□ -0.22
TRIM41-202ENST00000351937 IGHV1OR15-1A0A075B7D0 117 aa13.66□□□□□ -0.22
TRIM41-202ENST00000351937 LOC389332A0A1B0GUA5 103 aa13.66□□□□□ -0.22
TRIM41-202ENST00000351937 NXPH4O95158 308 aa13.66□□□□□ -0.22
TRIM41-202ENST00000351937 OR4C5Q8NGB2 326 aa13.66□□□□□ -0.22
TRIM41-202ENST00000351937 SORL1Q92673 2214 aa13.66□□□□□ -0.22
TRIM41-202ENST00000351937 HIVEP1P15822 2718 aa13.66□□□□□ -0.22
TRIM41-202ENST00000351937 SETXQ7Z333 2677 aaKnown RBP13.65□□□□□ -0.22
TRIM41-202ENST00000351937 MAP1LC3CQ9BXW4 147 aa13.65□□□□□ -0.22
TRIM41-202ENST00000351937 AGRNO00468 2067 aa13.65□□□□□ -0.22
TRIM41-202ENST00000351937 SPRY2O43597 315 aa13.65□□□□□ -0.22
TRIM41-202ENST00000351937 TNFRSF6BO95407 300 aa13.65□□□□□ -0.22
TRIM41-202ENST00000351937 KRTAP10-3P60369 221 aa13.65□□□□□ -0.22
TRIM41-202ENST00000351937 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms