RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ONECUT1Q9UBC0 465 aa11.41□□□□□ -0.58
TRAF3-202ENST00000351691 PRAC2D3DTV9 90 aa11.41□□□□□ -0.58
TRAF3-202ENST00000351691 SLC25A20O43772 301 aa11.41□□□□□ -0.58
TRAF3-202ENST00000351691 IGFL4Q6B9Z1 124 aa11.41□□□□□ -0.58
TRAF3-202ENST00000351691 SLC25A29Q8N8R3 303 aa11.41□□□□□ -0.58
TRAF3-202ENST00000351691 H3BVH4 76 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 TIMM23O14925 209 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 IFITM1P13164 125 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 C2orf66Q6UXQ4 117 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 IGHV1-69DA0A0B4J2H0 117 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 PPP1R17O96001 155 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 P0DMU3 169 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 FAM231AP0DMU4 169 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 FAM231CP0DMU5 169 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 DLX1P56177 255 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
TRAF3-202ENST00000351691 CTSGP08311 255 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 S4R3C0 116 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 PKD1L2Q7Z442 2459 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 ABCA1O95477 2261 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
TRAF3-202ENST00000351691 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
TRAF3-202ENST00000351691 SMG1Q96Q15 3661 aaKnown RBP11.39□□□□□ -0.59
TRAF3-202ENST00000351691 TRAV8-2A0A0B4J237 113 aa11.38□□□□□ -0.59
TRAF3-202ENST00000351691 ODF3BA8MYP8 253 aa11.38□□□□□ -0.59
TRAF3-202ENST00000351691 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
TRAF3-202ENST00000351691 CCL21O00585 134 aa11.38□□□□□ -0.59
TRAF3-202ENST00000351691 PRTN3P24158 256 aa11.38□□□□□ -0.59
TRAF3-202ENST00000351691 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
TRAF3-202ENST00000351691 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
TRAF3-202ENST00000351691 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
TRAF3-202ENST00000351691 LY6DQ14210 128 aa11.37□□□□□ -0.59
TRAF3-202ENST00000351691 C1orf122Q6ZSJ8 110 aa11.37□□□□□ -0.59
TRAF3-202ENST00000351691 PRB3Q04118 309 aaPredicted RBP11.37□□□□□ -0.59
TRAF3-202ENST00000351691 KLK15Q9H2R5 256 aa11.37□□□□□ -0.59
TRAF3-202ENST00000351691 DPH3P1Q9H4G8 78 aa11.37□□□□□ -0.59
TRAF3-202ENST00000351691 LENEPQ9Y5L5 61 aa11.37□□□□□ -0.59
TRAF3-202ENST00000351691 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 RNF223E7ERA6 249 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 KLHL30-AS1Q8NEE0 82 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 TRAV4A0A0B4J268 109 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 C9JAW5 83 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 BUB3O43684 328 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 CRYGDP07320 174 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 KLRB1Q12918 225 aa11.36□□□□□ -0.59
TRAF3-202ENST00000351691 POLEQ07864 2286 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 CCDC179H3BU77 68 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 C11orf71Q6IPW1 123 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 IGHV3-33P01772 117 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
TRAF3-202ENST00000351691 Q8N1Y9 231 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 TMEM141Q96I45 108 aa11.35□□□□□ -0.59
TRAF3-202ENST00000351691 ACACBO00763 2458 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 HERV-K104P63124 156 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 PMVKQ15126 192 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 KLK9Q2XQG4 91 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 KLK9Q9UKQ9 250 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 KALRNO60229 2985 aa11.34□□□□□ -0.59
TRAF3-202ENST00000351691 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.59
TRAF3-202ENST00000351691 ATXN8Q156A1 80 aa11.33□□□□□ -0.59
TRAF3-202ENST00000351691 RNF182Q8N6D2 247 aa11.33□□□□□ -0.59
TRAF3-202ENST00000351691 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.59
TRAF3-202ENST00000351691 EBI3Q14213 229 aa11.33□□□□□ -0.6
TRAF3-202ENST00000351691 Q6ZS46 218 aa11.33□□□□□ -0.6
TRAF3-202ENST00000351691 AMELXQ99217 191 aa11.33□□□□□ -0.6
TRAF3-202ENST00000351691 PRORYQ9H606 182 aa11.33□□□□□ -0.6
TRAF3-202ENST00000351691 TRAV8-4A0A0B4J246 113 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 CRLF1O75462 422 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 MDFICQ9P1T7 246 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 Q8N6K4 173 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
TRAF3-202ENST00000351691 TIMM17AQ99595 171 aa11.32□□□□□ -0.6
TRAF3-202ENST00000351691 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.31□□□□□ -0.6
TRAF3-202ENST00000351691 IGHV3-23P01764 117 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 CLEC3BP05452 202 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 HES1Q14469 280 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 NTN5Q8WTR8 489 aaPredicted RBP11.31□□□□□ -0.6
TRAF3-202ENST00000351691 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 ROS1P08922 2347 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 TRBV10-2A0A0K0K1G8 114 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 TSHBP01222 138 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
TRAF3-202ENST00000351691 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
TRAF3-202ENST00000351691 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-202ENST00000351691 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms