RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 DAD1P61803 113 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 MRPL35Q9NZE8 188 aaKnown RBP12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 MYMXA0A1B0GTQ4 84 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 F5H768 121 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 MEGF9Q9H1U4 602 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 EREGO14944 169 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 SPAG8Q99932 426 aaPredicted RBP12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 MSRB1Q9NZV6 116 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 ABCA12Q86UK0 2595 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 PAX4O43316 350 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 KIR3DS1Q14943 382 aa12.08□□□□□ -0.48
CARMIL3-201ENST00000342740 IGHV4OR15-8A0A075B7B6 117 aa12.07□□□□□ -0.48
CARMIL3-201ENST00000342740 A0A087WW49 117 aa12.07□□□□□ -0.48
CARMIL3-201ENST00000342740 APRG1Q8IVJ8 170 aa12.07□□□□□ -0.48
CARMIL3-201ENST00000342740 ZNF503Q96F45 646 aa12.07□□□□□ -0.48
CARMIL3-201ENST00000342740 ZNF48Q96MX3 618 aaPredicted RBP12.07□□□□□ -0.48
CARMIL3-201ENST00000342740 A6NDX4 124 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 K7EMT4 169 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 SRSF2Q01130 221 aaKnown RBP12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 MRPL52Q86TS9 123 aaKnown RBP12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 SS18Q15532 418 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 GPHB5Q86YW7 130 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 ZNF625Q96I27 306 aaPredicted RBP12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
CARMIL3-201ENST00000342740 F8VRH5 84 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 TNFRSF13BO14836 293 aaPredicted RBP12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 DLEU1O43261 78 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 CD5LO43866 347 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 GTSF1Q8WW33 167 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 UNQ9165/PRO28630Q6UXU0 137 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 ZNF747Q9BV97 191 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 HLA-DRB4P13762 266 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 HLA-DRB4X5D2U9 266 aa12.05□□□□□ -0.48
CARMIL3-201ENST00000342740 APOC4P55056 127 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 LOXL1Q08397 574 aaPredicted RBP12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 C2orf70A6NJV1 201 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 SNHG12Q9BXW3 62 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 SLC25A20O43772 301 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 C11orf71Q6IPW1 123 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 U3KQE9 123 aa12.04□□□□□ -0.48
CARMIL3-201ENST00000342740 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
CARMIL3-201ENST00000342740 NUPR1O60356 82 aa12.03□□□□□ -0.48
CARMIL3-201ENST00000342740 DEFB1P60022 68 aa12.03□□□□□ -0.48
CARMIL3-201ENST00000342740 S100A7L2Q5SY68 101 aa12.03□□□□□ -0.48
CARMIL3-201ENST00000342740 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
CARMIL3-201ENST00000342740 PGPEP1Q9NXJ5 209 aa12.03□□□□□ -0.48
CARMIL3-201ENST00000342740 JPT2Q9H910 190 aa12.02□□□□□ -0.48
CARMIL3-201ENST00000342740 DKK2Q9UBU2 259 aa12.02□□□□□ -0.48
CARMIL3-201ENST00000342740 TMEM89A2RUT3 159 aa12.02□□□□□ -0.49
CARMIL3-201ENST00000342740 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.49
CARMIL3-201ENST00000342740 NOP10Q9NPE3 64 aaKnown RBP12.02□□□□□ -0.49
CARMIL3-201ENST00000342740 COX8AP10176 69 aa12.02□□□□□ -0.49
CARMIL3-201ENST00000342740 KIAA1549Q9HCM3 1950 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 FRMD6-AS1P0C7T7 363 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 CCDC140Q96MF4 163 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 LRRK2Q5S007 2527 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 GAGE6Q13070 117 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 UBE2DNLQ8IWF7 75 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 LY6LH3BQJ8 138 aa12.01□□□□□ -0.49
CARMIL3-201ENST00000342740 PCP4P48539 62 aa12□□□□□ -0.49
CARMIL3-201ENST00000342740 CRYGBP07316 175 aa12□□□□□ -0.49
CARMIL3-201ENST00000342740 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 TANC2Q9HCD6 1990 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 CDSNQ15517 529 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 CDPF1Q6NVV7 123 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 GHRHP01286 108 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 HCFC1P51610 2035 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 TSPAN13O95857 204 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 EBI3Q14213 229 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 PCNTO95613 3336 aa11.99□□□□□ -0.49
CARMIL3-201ENST00000342740 PRSS29PA6NIE9 313 aa11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 COX11Q9Y6N1 276 aa11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 K7EMI3 77 aa11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 LEPROTO15243 131 aa11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 DLX4Q92988 240 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
CARMIL3-201ENST00000342740 C19orf71A6NCJ1 209 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 IGF1P05019 195 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 ADAMTSL5Q6ZMM2 481 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 A0A096LPF7 62 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 TRBV6-1A0A0K0K1D8 114 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 Q8N1Y9 231 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
CARMIL3-201ENST00000342740 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms