RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 RASL10AQ92737 203 aa12.28□□□□□ -0.44
SCARB1-202ENST00000339570 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
SCARB1-202ENST00000339570 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.44
SCARB1-202ENST00000339570 F8VRH5 84 aa12.27□□□□□ -0.44
SCARB1-202ENST00000339570 ADORA2A-AS1P86434 159 aa12.27□□□□□ -0.44
SCARB1-202ENST00000339570 Q8N6K4 173 aa12.27□□□□□ -0.44
SCARB1-202ENST00000339570 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.44
SCARB1-202ENST00000339570 ZANQ9Y493 2812 aa12.27□□□□□ -0.44
SCARB1-202ENST00000339570 USP9XQ93008 2570 aaPredicted RBP12.27□□□□□ -0.45
SCARB1-202ENST00000339570 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.45
SCARB1-202ENST00000339570 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 E9PLD3 99 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 PF4V1P10720 104 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 CLEC2AQ6UVW9 174 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 OR10J6PQ8NGY7 276 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 HIGD1BQ9P298 99 aa12.27□□□□□ -0.45
SCARB1-202ENST00000339570 HOXA3O43365 443 aaPredicted RBP12.26□□□□□ -0.45
SCARB1-202ENST00000339570 LINC00477Q96M19 166 aa12.26□□□□□ -0.45
SCARB1-202ENST00000339570 TM2D2Q9BX73 214 aa12.26□□□□□ -0.45
SCARB1-202ENST00000339570 PTPN13Q12923 2485 aa12.26□□□□□ -0.45
SCARB1-202ENST00000339570 SMPXQ9UHP9 88 aa12.26□□□□□ -0.45
SCARB1-202ENST00000339570 ASIPP42127 132 aa12.26□□□□□ -0.45
SCARB1-202ENST00000339570 ZNF48Q96MX3 618 aaPredicted RBP12.26□□□□□ -0.45
SCARB1-202ENST00000339570 LGALS1P09382 135 aaKnown RBP12.25□□□□□ -0.45
SCARB1-202ENST00000339570 PLNP26678 52 aa12.25□□□□□ -0.45
SCARB1-202ENST00000339570 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
SCARB1-202ENST00000339570 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
SCARB1-202ENST00000339570 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
SCARB1-202ENST00000339570 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
SCARB1-202ENST00000339570 COX8CQ7Z4L0 72 aa12.24□□□□□ -0.45
SCARB1-202ENST00000339570 MUC4Q99102 2169 aa12.24□□□□□ -0.45
SCARB1-202ENST00000339570 TRAV41A0A0B4J266 112 aa12.24□□□□□ -0.45
SCARB1-202ENST00000339570 TP53TG1Q9Y2A0 90 aa12.24□□□□□ -0.45
SCARB1-202ENST00000339570 SIRPDQ9H106 197 aa12.23□□□□□ -0.45
SCARB1-202ENST00000339570 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
SCARB1-202ENST00000339570 TRAV12-3A0A0B4J271 114 aa12.23□□□□□ -0.45
SCARB1-202ENST00000339570 J3QR89 54 aa12.23□□□□□ -0.45
SCARB1-202ENST00000339570 SCGB1C2P0DMR2 95 aa12.23□□□□□ -0.45
SCARB1-202ENST00000339570 MYO18BQ8IUG5 2567 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 CENPVL3A0A0U1RRI6 287 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 Q6ZS46 218 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 RAX2Q96IS3 184 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 SPOCK3Q9BQ16 436 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 K7ENP7 123 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 NPFFO15130 113 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 ACACBO00763 2458 aa12.22□□□□□ -0.45
SCARB1-202ENST00000339570 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 PSMG3-AS1Q96PY0 264 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 FLNCQ14315 2725 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 C11orf86A6NJI1 115 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 NDUFS8O00217 210 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 RAB9AP51151 201 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 LY6DQ14210 128 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 ZFAND2AQ8N6M9 145 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 SYT8Q8NBV8 401 aa12.21□□□□□ -0.45
SCARB1-202ENST00000339570 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.46
SCARB1-202ENST00000339570 F8W1H4 67 aa12.21□□□□□ -0.46
SCARB1-202ENST00000339570 CD7P09564 240 aa12.21□□□□□ -0.46
SCARB1-202ENST00000339570 ORMDL2Q53FV1 153 aa12.21□□□□□ -0.46
SCARB1-202ENST00000339570 BEX4Q9NWD9 120 aaPredicted RBP12.21□□□□□ -0.46
SCARB1-202ENST00000339570 BLCAPP62952 87 aa12.2□□□□□ -0.46
SCARB1-202ENST00000339570 MORN3Q6PF18 240 aaPredicted RBP12.2□□□□□ -0.46
SCARB1-202ENST00000339570 RBAKDNA6NC62 111 aa12.2□□□□□ -0.46
SCARB1-202ENST00000339570 UBE2E1P51965 193 aa12.2□□□□□ -0.46
SCARB1-202ENST00000339570 C9orf47Q6ZRZ4 202 aa12.2□□□□□ -0.46
SCARB1-202ENST00000339570 IGHV3-73A0A0B4J1V6 119 aa12.19□□□□□ -0.46
SCARB1-202ENST00000339570 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
SCARB1-202ENST00000339570 ADARB2-AS1A8MUL3 147 aa12.19□□□□□ -0.46
SCARB1-202ENST00000339570 ITPR1Q14643 2758 aa12.19□□□□□ -0.46
SCARB1-202ENST00000339570 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
SCARB1-202ENST00000339570 C5orf56Q8N8D9 126 aa12.19□□□□□ -0.46
SCARB1-202ENST00000339570 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
SCARB1-202ENST00000339570 TRBV7-1A0A0A6YYK4 115 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 TOMM6Q96B49 74 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 AJUBAQ96IF1 538 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 ZNF688P0C7X2 276 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 EBI3Q14213 229 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 DUX5Q96PT3 197 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
SCARB1-202ENST00000339570 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
SCARB1-202ENST00000339570 RHPN1-AS1Q9BWJ2 59 aa12.17□□□□□ -0.46
SCARB1-202ENST00000339570 ZFYVE26Q68DK2 2539 aa12.17□□□□□ -0.46
SCARB1-202ENST00000339570 NPC2P61916 151 aa12.17□□□□□ -0.46
SCARB1-202ENST00000339570 ZNF56Q15929 161 aa12.17□□□□□ -0.46
SCARB1-202ENST00000339570 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
SCARB1-202ENST00000339570 FAM159AQ6UWV7 190 aa12.17□□□□□ -0.46
SCARB1-202ENST00000339570 TSPAN13O95857 204 aa12.16□□□□□ -0.46
SCARB1-202ENST00000339570 SRSF2Q01130 221 aaKnown RBP12.16□□□□□ -0.46
SCARB1-202ENST00000339570 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
SCARB1-202ENST00000339570 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
SCARB1-202ENST00000339570 H3BUX3 64 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms