RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TM2D2Q9BX73 214 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 NREPQ16612 68 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 ANGP03950 147 aaKnown RBP8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 ELANEP08246 267 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 MLST8Q9BVC4 326 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 A6NED7 52 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 LGALS9O00182 355 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 ATP1A1-AS1Q5TC04 95 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 SIGLEC9Q9Y336 463 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 K7EN84 100 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 ZFP2Q6ZN57 461 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 SLC22A18ASQ8N1D0 253 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 C4orf51C9J302 202 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 IGHV1-2P23083 117 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 FOXE3Q13461 319 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 TMEM256-PLSCR3K7ERE1 68 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 M0QXV9 152 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 PIP4P2Q8N4L2 257 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 FANCD2OSQ96PS1 177 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 KLK9Q9UKQ9 250 aa8.28□□□□□ -1.08
SPTBN1-201ENST00000333896 STPG1Q5TH74 334 aa8.27□□□□□ -1.08
SPTBN1-201ENST00000333896 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
SPTBN1-201ENST00000333896 PAX9P55771 341 aa8.27□□□□□ -1.09
SPTBN1-201ENST00000333896 Q6P435 159 aa8.27□□□□□ -1.09
SPTBN1-201ENST00000333896 XCL1P47992 114 aa8.27□□□□□ -1.09
SPTBN1-201ENST00000333896 RBAKDNA6NC62 111 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 COX7CP15954 63 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 SPINK13Q1W4C9 94 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 RMI2Q96E14 147 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 A0A096LPF7 62 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 LILRA6Q6PI73 481 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 H0Y9J4 135 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 ETV2O00321 342 aaPredicted RBP8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 NDUFA11Q86Y39 141 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 IGKV1D-43A0A0B4J1Z2 117 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 IGKV1-39P01597 117 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 IGKV1D-39P04432 117 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 RFPL3SP0C7P2 107 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 C9orf47Q6ZRZ4 202 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
SPTBN1-201ENST00000333896 ETDCA0A1B0GVM5 59 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 ZNRF2Q8NHG8 242 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 TRBV19A0A075B6N1 114 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 WIPF3A6NGB9 483 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 LTBP1Q14766 1721 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 P0DMU3 169 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 XCL2Q9UBD3 114 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 LYPD6Q86Y78 171 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 PKD1L2Q7Z442 2459 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 SDHAF1A6NFY7 115 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 LYNX1G3V0Z9 82 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 TGFBR3LH3BV60 316 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 LYNX1P0DP58 116 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 USMG5Q96IX5 58 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 CTRLP40313 264 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 SERP1Q9Y6X1 66 aa8.25□□□□□ -1.09
SPTBN1-201ENST00000333896 A0A087WV48 116 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 IGKV1-27A0A075B6S5 117 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 SMIM26A0A096LP01 95 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 IGHV1-3A0A0C4DH29 117 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 IGF2BP2-AS1Q96M15 143 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 TMEM200BQ69YZ2 307 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 DYNAPQ8N1N2 210 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 RNF152Q8N8N0 203 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 NRGNQ92686 78 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 FGFBP3Q8TAT2 258 aa8.24□□□□□ -1.09
SPTBN1-201ENST00000333896 FOXF2Q12947 444 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 Q6ZRM9 215 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 TMEM61Q8N0U2 210 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 IGKV2D-24A0A075B6R9 120 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 TCL1BO95988 128 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 FXYD5Q96DB9 178 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 PRR25Q96S07 402 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 EFNA4P52798 201 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 ZC2HC1AQ96GY0 325 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 RHPN1-AS1Q9BWJ2 59 aa8.23□□□□□ -1.09
SPTBN1-201ENST00000333896 ZNF503Q96F45 646 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 DAZ1Q9NQZ3 744 aaKnown RBP8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 SRRM5B3KS81 715 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 ODF1Q14990 250 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 ZNF837Q96EG3 531 aaPredicted RBP8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 Q9H8V8 135 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 IGKV1-12A0A0C4DH73 117 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms