RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 C15orf56Q8N910 161 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 KLK12Q9UKR0 248 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 FAM24AA6NFZ4 105 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 M0R3E3 92 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 GOSR2O14653 212 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 TSC22D2O75157 780 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM128Q5BJH2 165 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 MZT2AQ6P582 158 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 Q6ZRG5 221 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 FP248Q71RG6 208 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-201ENST00000323441 PRSS3P2Q8NHM4 247 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 DYNC2LI1Q8TCX1 351 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SMIM4Q8WVI0 70 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 KCNS1Q96KK3 526 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 AAMDCQ9H7C9 122 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 MGAT4CQ9UBM8 478 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SCP2D1Q9UJQ7 156 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 URGCP-MRPS24S4R325 110 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 TRAV1-1A0A0B4J248 108 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 GZMBP10144 247 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 RPL29P47914 159 aaKnown RBP1.66□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM183BQ1AE95 376 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 LINC00242Q5T6M2 205 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM183AQ8IXX5 376 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 DEDD2Q8WXF8 326 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 AP3S1Q92572 193 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 CNBD2Q96M20 576 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 MGST2Q99735 147 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 COMMD3Q9UBI1 195 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 IGLV7-46A0A075B6I9 117 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 TRAV6A0A075B6T7 132 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 SMCO3A2RU48 225 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 HPGDSO60760 199 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 SLC38A11Q08AI6 406 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 MAJINQ3KP22 176 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 UBE2WQ96B02 151 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 C9orf85Q96MD7 179 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 MLST8Q9BVC4 326 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 PSENENQ9NZ42 101 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 PAIP2BQ9ULR5 123 aaKnown RBP1.66□□□□□ -2.14
HIF1A-201ENST00000323441 TIMM9Q9Y5J7 89 aa1.66□□□□□ -2.14
HIF1A-201ENST00000323441 GVQW2A0A096LPI5 108 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-201ENST00000323441 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-201ENST00000323441 TRAV21A0A0B4J279 112 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 ANKRD20A5PA0PJZ0 165 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 PGPA6NDG6 321 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 A8MWV9 139 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 TYMSP04818 313 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 COX6A2Q02221 97 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 KCNIP4Q6PIL6 250 aa1.65□□□□□ -2.14
HIF1A-201ENST00000323441 IGKV2-40A0A087WW87 121 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-201ENST00000323441 H3BTX0 84 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 IFNA7P01567 189 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 IGKV2D-40P01614 121 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-201ENST00000323441 ZNF876PQ49A33 203 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 GAGE13Q4V321 117 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 CLVS1Q8IUQ0 354 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-201ENST00000323441 CCDC59Q9P031 241 aaKnown RBP1.65□□□□□ -2.15
HIF1A-201ENST00000323441 EXTL2Q9UBQ6 330 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 PKIGQ9Y2B9 76 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 A0A087WX48 190 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 TRBV10-1A0A0K0K1A3 114 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 KMT2DO14686 5537 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 TGFBR1P36897 503 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 RPS10P46783 165 aaKnown RBP1.65□□□□□ -2.15
HIF1A-201ENST00000323441 CSN1S1P47710 185 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 CAMLGP49069 296 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 MUC21Q5SSG8 566 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 FAAP20Q6NZ36 180 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP11-1Q8IUC1 163 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 EXOC3-AS1Q8N2X6 119 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 OR10G8Q8NGN5 311 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 RAB2BQ8WUD1 216 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 ASB13Q8WXK3 278 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 C20orf85Q9H1P6 137 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 MED28Q9H204 178 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 PARLQ9H300 379 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 AP5S1Q9NUS5 200 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 Q9UF83 564 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 WDR83OSQ9Y284 106 aa1.65□□□□□ -2.15
HIF1A-201ENST00000323441 C5orf51A6NDU8 294 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 FAM25AB3EWG3 89 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 FAM25CB3EWG5 89 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 FAM25GB3EWG6 89 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 H3BP45 60 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 RHODO00212 210 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 GNRH2O43555 120 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 SFT2D2O95562 160 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 CRPP02741 224 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 NBEAP1P0C6P0 100 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 LCE4AQ5TA78 99 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 IZUMO2Q6UXV1 221 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 NRARPQ7Z6K4 114 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 FAM167A-AS1Q96KT0 104 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 SLC25A21Q9BQT8 299 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-201ENST00000323441 PPDPFQ9H3Y8 114 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 LYRM2Q9NU23 88 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-201ENST00000323441 LINC00846Q9NV44 126 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 TRAV8-4A0A0B4J246 113 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 P01737 135 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms