RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 A0A1B0GWB2 263 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 TMEM95Q3KNT9 176 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 SPRY2O43597 315 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 FHL3Q13643 280 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 KLK15Q9H2R5 256 aa11.89□□□□□ -0.51
SHROOM1-201ENST00000319854 CLPSL1A2RUU4 121 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 PF4V1P10720 104 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 CDIP1Q9H305 208 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 NF1P21359 2839 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 IGLC6P0CF74 106 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 SRD5A1P18405 259 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 RRN3P1Q2M238 152 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 UNQ9165/PRO28630Q6UXU0 137 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 METTL26Q96S19 204 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 HIF1ANQ9NWT6 349 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
SHROOM1-201ENST00000319854 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 PSMG3-AS1Q96PY0 264 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 AVPP01185 164 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 SRSF1Q07955 248 aaKnown RBP eCLIP11.87□□□□□ -0.511e-7■■□□□ 13.1
SHROOM1-201ENST00000319854 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 GATA3P23771 443 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
SHROOM1-201ENST00000319854 MT-ATP8P03928 68 aa11.86□□□□□ -0.51
SHROOM1-201ENST00000319854 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
SHROOM1-201ENST00000319854 APOMO95445 188 aa11.86□□□□□ -0.51
SHROOM1-201ENST00000319854 ARL3P36405 182 aa11.86□□□□□ -0.51
SHROOM1-201ENST00000319854 MORN3Q6PF18 240 aaPredicted RBP11.86□□□□□ -0.51
SHROOM1-201ENST00000319854 FOXI1Q12951 378 aa11.85□□□□□ -0.51
SHROOM1-201ENST00000319854 GLMPQ8WWB7 406 aa11.85□□□□□ -0.51
SHROOM1-201ENST00000319854 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
SHROOM1-201ENST00000319854 C8orf86Q6ZUL3 223 aa11.85□□□□□ -0.51
SHROOM1-201ENST00000319854 C16orf92Q96LL3 132 aa11.85□□□□□ -0.51
SHROOM1-201ENST00000319854 IGLV2-18A0A075B6J9 118 aa11.85□□□□□ -0.51
SHROOM1-201ENST00000319854 IGF1P05019 195 aa11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 PTH2Q96A98 100 aa11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 AGPAT4-IT1Q9H0P7 198 aa11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 MRPL16Q9NX20 251 aaKnown RBP11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 ACANP16112 2415 aa11.84□□□□□ -0.51
SHROOM1-201ENST00000319854 SPINK8P0C7L1 97 aa11.83□□□□□ -0.51
SHROOM1-201ENST00000319854 TRAV26-2A0A0B4J265 109 aa11.83□□□□□ -0.52
SHROOM1-201ENST00000319854 MSMBP08118 114 aa11.83□□□□□ -0.52
SHROOM1-201ENST00000319854 CYSLTR1Q9Y271 337 aa11.83□□□□□ -0.52
SHROOM1-201ENST00000319854 MTORP42345 2549 aa11.83□□□□□ -0.52
SHROOM1-201ENST00000319854 ATP5LO75964 103 aa11.83□□□□□ -0.52
SHROOM1-201ENST00000319854 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 EDN2P20800 178 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 XGP55808 180 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 F6UB75 175 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 TMEM78Q5T7P6 136 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 C10orf99Q6UWK7 81 aa11.82□□□□□ -0.52
SHROOM1-201ENST00000319854 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 FABP5P3A8MUU1 101 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 TAL2Q16559 108 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 COX8CQ7Z4L0 72 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 Q8N8P6 123 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 DEFB104AQ8WTQ1 72 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 C11orf21Q9P2W6 132 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 ZNF418Q8TF45 676 aaPredicted RBP11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 C1QTNF4Q9BXJ3 329 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
SHROOM1-201ENST00000319854 RNF183Q96D59 192 aa11.8□□□□□ -0.52
SHROOM1-201ENST00000319854 UFC1Q9Y3C8 167 aa11.8□□□□□ -0.52
SHROOM1-201ENST00000319854 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
SHROOM1-201ENST00000319854 A0A087WX48 190 aa11.8□□□□□ -0.52
SHROOM1-201ENST00000319854 SS18L2Q9UHA2 77 aa11.8□□□□□ -0.52
SHROOM1-201ENST00000319854 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 DUX5Q96PT3 197 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 CNFNQ9BYD5 112 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 NOTCH2Q04721 2471 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 IGHV4-59P01825 116 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 PRRC2AP48634 2157 aaKnown RBP11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 TGFAP01135 160 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 Q6ZUT4 128 aa11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 BBC3Q96PG8 261 aaPredicted RBP11.79□□□□□ -0.52
SHROOM1-201ENST00000319854 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
SHROOM1-201ENST00000319854 APCP25054 2843 aa11.78□□□□□ -0.52
SHROOM1-201ENST00000319854 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
SHROOM1-201ENST00000319854 LINC01549A6NIU2 74 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms