RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
PDLIM5-202ENST00000318007 MSRB1Q9NZV6 116 aa11.07□□□□□ -0.64
PDLIM5-202ENST00000318007 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 RPS20P60866 119 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 CT83Q5H943 113 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 SPANXN1Q5VSR9 72 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 Q8NAQ8 132 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 TM2D3Q9BRN9 247 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 NAT8BQ9UHF3 227 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 MUC4Q99102 2169 aa11.06□□□□□ -0.64
PDLIM5-202ENST00000318007 A0A087WWC5 75 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 B9D2Q9BPU9 175 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 ZMAT4Q9H898 229 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 JPT2Q9H910 190 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 CAMPP49913 170 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 ZNF876PQ49A33 203 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 Q6ZTI0 123 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 CELA1Q9UNI1 258 aa11.05□□□□□ -0.64
PDLIM5-202ENST00000318007 TGIF2-C20orf24A0A0A6YYL0 155 aa11.04□□□□□ -0.64
PDLIM5-202ENST00000318007 NTF3P20783 257 aa11.04□□□□□ -0.64
PDLIM5-202ENST00000318007 TWIST1Q15672 202 aa11.04□□□□□ -0.64
PDLIM5-202ENST00000318007 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-202ENST00000318007 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 GAGE7O76087 117 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 MIFP14174 115 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 S100PP25815 95 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 KCNIP4Q6PIL6 250 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 TP53TG1Q9Y2A0 90 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 IGHV3-73A0A0B4J1V6 119 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 FOXA3P55318 350 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 TGP01266 2768 aa11.03□□□□□ -0.64
PDLIM5-202ENST00000318007 GFRA4Q9GZZ7 299 aa11.02□□□□□ -0.65
PDLIM5-202ENST00000318007 A0A087WWL8 130 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 SNAI2O43623 268 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 OR5AL1P0C617 328 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 CTRLP40313 264 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 ELOBQ15370 118 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 CXCL1P09341 107 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 SSBP4Q9BWG4 385 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
PDLIM5-202ENST00000318007 STAB2Q8WWQ8 2551 aa11□□□□□ -0.65
PDLIM5-202ENST00000318007 TRGV2A0A075B6R0 118 aa11□□□□□ -0.65
PDLIM5-202ENST00000318007 M0R2P5 195 aa11□□□□□ -0.65
PDLIM5-202ENST00000318007 RAB4BP61018 213 aa11□□□□□ -0.65
PDLIM5-202ENST00000318007 IL17DQ8TAD2 202 aa11□□□□□ -0.65
PDLIM5-202ENST00000318007 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
PDLIM5-202ENST00000318007 F2Z2F3 143 aa10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 EVI2AP22794 236 aa10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 C14orf178Q8N769 122 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 SAMD10Q9BYL1 202 aa10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 DNLZQ5SXM8 178 aa10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 ZFP82Q8N141 532 aa10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 DKK2Q9UBU2 259 aa10.99□□□□□ -0.65
PDLIM5-202ENST00000318007 FAM231BA6NCW3 169 aa10.98□□□□□ -0.65
PDLIM5-202ENST00000318007 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
PDLIM5-202ENST00000318007 BTF3L4Q96K17 158 aa10.98□□□□□ -0.65
PDLIM5-202ENST00000318007 HTN3P15516 51 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 DAZ2Q13117 558 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 SPXQ9BT56 116 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 CXorf65A6NEN9 183 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 MGPP08493 103 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 KRTAP3-3Q9BYR6 98 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
PDLIM5-202ENST00000318007 MED14OSP0DP75 135 aa10.96□□□□□ -0.65
PDLIM5-202ENST00000318007 NANOS2P60321 138 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-202ENST00000318007 HBBP68871 147 aa10.96□□□□□ -0.65
PDLIM5-202ENST00000318007 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
PDLIM5-202ENST00000318007 SPART-AS1P0CW21 52 aa10.96□□□□□ -0.66
PDLIM5-202ENST00000318007 DAD1P61803 113 aa10.96□□□□□ -0.66
PDLIM5-202ENST00000318007 RIGQ13278 110 aa10.96□□□□□ -0.66
PDLIM5-202ENST00000318007 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 CACNG7P62955 275 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 AMN1Q8IY45 258 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 POM121L12Q8N7R1 296 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 RASL10AQ92737 203 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 FAM210BQ96KR6 192 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 AP1S3Q96PC3 154 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
PDLIM5-202ENST00000318007 SMIM17P0DL12 118 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms