RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 INSP01308 110 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 S100A6P06703 90 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 FXYD7P58549 80 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 KRTAP10-11P60412 298 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 TWIST1Q15672 202 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 TMEM256Q8N2U0 113 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 TRGV11A0A075B6L2 103 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 H3BVH4 76 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 NXPH4O95158 308 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 Q8N1Y9 231 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 C9orf85Q96MD7 179 aa9.37□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 Q0VG73 95 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 LOC102724200A0A096LPH7 203 aaPredicted RBP9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 LOC105371267A0A1B0GV96 52 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 GIG44P09565 113 aaPredicted RBP9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 NDUFA6P56556 154 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 C1QTNF4Q9BXJ3 329 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MSRB1Q9NZV6 116 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MEGF8Q7Z7M0 2845 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 HOXA5P20719 270 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 KIAA1644Q3SXP7 199 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 KPRPQ5T749 579 aaPredicted RBP9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 DEFB125Q8N687 156 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 PTH2Q96A98 100 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 ALKBH7Q9BT30 221 aaPredicted RBP9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 U3KQK5 164 aa9.34□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 UBE2CO00762 179 aa9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 SRIP30626 198 aa9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 LINC01587Q99440 93 aa9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 PRKDCP78527 4128 aaKnown RBP9.33□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 CBY3A6NI87 242 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 PPBPP02775 128 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 RPL35AP18077 110 aaKnown RBP9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 RAB4AP20338 218 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 SSTP61278 116 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 RNF185Q96GF1 192 aa9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 M0R381 172 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 ESDP10768 282 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 EVI2AP22794 236 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 MRPL51Q4U2R6 128 aaKnown RBP9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 POM121L12Q8N7R1 296 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 SYT8Q8NBV8 401 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 KIR2DL5BQ8NHK3 375 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 C18orf32Q8TCD1 76 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 SPXQ9BT56 116 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 MUC4Q99102 2169 aa9.31□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 ZNF415Q09FC8 603 aa9.3□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 NDUFAF3Q9BU61 184 aa9.3□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 A6NJY4 79 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 ORMDL3Q8N138 153 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 HIST3H2BBQ8N257 126 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 AP1S3Q96PC3 154 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 KIF25-AS1Q9Y6Z4 181 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 SPRY2O43597 315 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 GSN-AS1Q9NRJ2 163 aa9.29□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 M0R2P5 195 aa9.28□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 CKS2P33552 79 aa9.28□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 BAGE3Q86Y29 109 aa9.28□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 RNASE8Q8TDE3 154 aaKnown RBP9.28□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
SHANK2-AS3-201ENST00000307548 A8MZ25 164 aa9.27□□□□□ -0.93
SHANK2-AS3-201ENST00000307548 D6R8Y8 96 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms