RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 C10orf126Q8N4M7 172 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 C3orf22Q8N5N4 141 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 Q8N9W7 124 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 Q96MF0 132 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 FANCD2OSQ96PS1 177 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 GNB1LQ9BYB4 327 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 TMEM191AQ9H0A3 160 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 TLN2Q9Y4G6 2542 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 IGHV7-81A0A0B4J1V7 117 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 ZNF688P0C7X2 276 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 CD24P25063 80 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 CD164Q04900 197 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 ASPHD1Q5U4P2 390 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 MAPK1IP1LQ8NDC0 245 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 Q9H3A6 140 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 TEX15Q9BXT5 2789 aa5.87□□□□□ -1.47
TRIM42-201ENST00000286349 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 SMIM27A0A1W2PRY6 76 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 FAM181BA6NEQ2 426 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 E9PLD3 99 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 M0R2P5 195 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 UQCRQO14949 82 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 PDE6HQ13956 83 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 AMTNQ6UX39 209 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 ZNF491Q8N8L2 437 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 TSKUQ8WUA8 353 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 LINC00526Q96FQ7 95 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 TMEM70Q9BUB7 260 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 PLXNB1O43157 2135 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 ABCA1O95477 2261 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 RNF223E7ERA6 249 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 TCRAP04437 139 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 IL4P05112 153 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 AJUBAQ96IF1 538 aa5.86□□□□□ -1.47
TRIM42-201ENST00000286349 C2orf70A6NJV1 201 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 NDPQ00604 133 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 EXOC3-AS1Q8N2X6 119 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 TRBV19A0A075B6N1 114 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 IGHV1-69DA0A0B4J2H0 117 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 IZUMO1RA6ND01 250 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 LTAP01374 205 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 IGHV1-69P01742 117 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 EGR2P11161 476 aaPredicted RBP5.85□□□□□ -1.47
TRIM42-201ENST00000286349 ZNF492Q9P255 531 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 MOB4Q9Y3A3 225 aa5.85□□□□□ -1.47
TRIM42-201ENST00000286349 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 OXTP01178 125 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 HLA-DQA1P01909 254 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 AMY1AP04745 511 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 SLC25A16P16260 332 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 LEPP41159 167 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 DPH3Q96FX2 82 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.84□□□□□ -1.47
TRIM42-201ENST00000286349 ANK3Q12955 4377 aaKnown RBP5.84□□□□□ -1.47
TRIM42-201ENST00000286349 BMPR1BO00238 502 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 TMEM258P61165 79 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 LOXL1Q08397 574 aaPredicted RBP5.84□□□□□ -1.47
TRIM42-201ENST00000286349 KLF17Q5JT82 389 aaPredicted RBP5.84□□□□□ -1.47
TRIM42-201ENST00000286349 FAM120AOSQ5T036 256 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 EBLN2Q6P2I7 272 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 MORN3Q6PF18 240 aaPredicted RBP5.84□□□□□ -1.47
TRIM42-201ENST00000286349 ATP5L2Q7Z4Y8 100 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 PIP4P2Q8N4L2 257 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 LINC00479Q96M42 142 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 GFRA4Q9GZZ7 299 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 AAMDCQ9H7C9 122 aa5.84□□□□□ -1.47
TRIM42-201ENST00000286349 ZNF331Q9NQX6 463 aaPredicted RBP5.84□□□□□ -1.47
TRIM42-201ENST00000286349 TRBV7-1A0A0A6YYK4 115 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 F8W735 103 aaPredicted RBP5.83□□□□□ -1.48
TRIM42-201ENST00000286349 OVOL1O14753 267 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 DPM2O94777 84 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 LGALS1P09382 135 aaKnown RBP5.83□□□□□ -1.48
TRIM42-201ENST00000286349 FRMD6-AS1P0C7T7 363 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 CRIP2P52943 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM42-201ENST00000286349 C5orf56Q8N8D9 126 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 EEF1AKMT3Q96AZ1 226 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 CARD19Q96LW7 228 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 C7orf69Q9H7B7 122 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 PEMTQ9UBM1 199 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 CSPG4Q6UVK1 2322 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 ITPR3Q14573 2671 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 NAV3Q8IVL0 2385 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 TRAV4A0A0B4J268 109 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 A8MWL6 223 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 J3QQQ9 107 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 MRPS12O15235 138 aaKnown RBP5.83□□□□□ -1.48
TRIM42-201ENST00000286349 ATP6V0E1O15342 81 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 NCR2O95944 276 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 MSMBP08118 114 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 CSN1S1P47710 185 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 KRTAP1-1Q07627 177 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 PRIMA1Q86XR5 153 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 FAM19A2Q8N3H0 131 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 ZNF414Q96IQ9 312 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 TP73-AS1Q9UF72 201 aa5.83□□□□□ -1.48
TRIM42-201ENST00000286349 PYGO1Q9Y3Y4 419 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms