RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 C9orf47Q6ZRZ4 202 aa6.78□□□□□ -1.32
SCUBE3-201ENST00000274938 SCN5AQ14524 2016 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 RALGAPA2Q2PPJ7 1873 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 SCN10AQ9Y5Y9 1956 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 A0A0J9YY99 117 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 NDUFA11Q86Y39 141 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 HOXB4P17483 251 aaPredicted RBP6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 ODF1Q14990 250 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 PROK2Q9HC23 129 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 MYOFQ9NZM1 2061 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 GYPEP15421 78 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 ARTNQ5T4W7 220 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 CLEC2BQ92478 149 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 DKK4Q9UBT3 224 aa6.77□□□□□ -1.33
SCUBE3-201ENST00000274938 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 VPREB3Q9UKI3 123 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 IGLV11-55A0A075B6I3 123 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 V9GYY9 64 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 NDUFC2-KCTD14E9PQ53 114 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 PATE2Q6UY27 113 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 RNF183Q96D59 192 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 GTSF1Q8WW33 167 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 UPK3BQ9BT76 320 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 MSRB1Q9NZV6 116 aa6.76□□□□□ -1.33
SCUBE3-201ENST00000274938 WI2-2373I1.2A0A1W2PRP0 233 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 K7EIM0 57 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 SPART-AS1P0CW21 52 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 NCR3O14931 201 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 MIAQ16674 131 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 COX7BP24311 80 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 UBE2AP49459 152 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 ESPL1Q14674 2120 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 DOCK6Q96HP0 2047 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 CENPVL3A0A0U1RRI6 287 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 IGKV1-17P01599 117 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 Q6ZSR3 168 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 Q96MF0 132 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 GREB1LQ9C091 1923 aaPredicted RBP6.75□□□□□ -1.33
SCUBE3-201ENST00000274938 K7EMT4 169 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 FAM167A-AS1Q96KT0 104 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 K7ENP7 123 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 C3orf22Q8N5N4 141 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 CTSGP08311 255 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 CCL18P55774 89 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 C9orf66Q5T8R8 295 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 Q9HAA7 133 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 BPY2O14599 106 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 TCL1BO95988 128 aa6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 RPL39P62891 51 aaKnown RBP6.74□□□□□ -1.33
SCUBE3-201ENST00000274938 TEX22C9J3V5 150 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 BRCA1P38398 1863 aaKnown RBP6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 C11orf53Q8IXP5 236 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 CCL24O00175 119 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 HIST2H2BDQ6DRA6 164 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 DAND5Q8N907 189 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 TM2D2Q9BX73 214 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 IGHV7-81A0A0B4J1V7 117 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 K7ERS5 55 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 FAM110AQ9BQ89 295 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 APC2O95996 2303 aa6.73□□□□□ -1.33
SCUBE3-201ENST00000274938 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 CTSZQ9UBR2 303 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 GTF3C1Q12789 2109 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 KRTAP27-1Q3LI81 207 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 C19orf71A6NCJ1 209 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 C20orf197Q8N268 126 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 AJUBAQ96IF1 538 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 NYNRINQ9P2P1 1898 aaKnown RBP6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 IGLV10-54A0A075B6I4 117 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 C2orf70A6NJV1 201 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 NDUFC1O43677 76 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 IGHV3-30-3P0DP02 117 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 PTH2Q96A98 100 aa6.72□□□□□ -1.33
SCUBE3-201ENST00000274938 TRBV10-1A0A0K0K1A3 114 aa6.71□□□□□ -1.33
SCUBE3-201ENST00000274938 LRRK1Q38SD2 2015 aa6.71□□□□□ -1.33
SCUBE3-201ENST00000274938 TRAV23DV6A0A075B6W5 121 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 IGHV3-30P01768 117 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 IGHV3-33P01772 117 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 IGHV3-30-5P0DP03 117 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 DEFB112Q30KQ8 113 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms