RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ERASQ7Z444 233 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 PEF1Q9UBV8 284 aaKnown RBP9.74□□□□□ -0.85
CPSF6-201ENST00000266679 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 FGF6P10767 208 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 SLC25A16P16260 332 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 S100A4P26447 101 aaKnown RBP9.74□□□□□ -0.85
CPSF6-201ENST00000266679 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 LINC01356Q8N9X3 169 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 SMPXQ9UHP9 88 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.74□□□□□ -0.852e-7■■■■□ 22.4
CPSF6-201ENST00000266679 GATA3P23771 443 aa9.73□□□□□ -0.85
CPSF6-201ENST00000266679 ASIPP42127 132 aa9.73□□□□□ -0.85
CPSF6-201ENST00000266679 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
CPSF6-201ENST00000266679 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
CPSF6-201ENST00000266679 OR1N2Q8NGR9 330 aa9.73□□□□□ -0.85
CPSF6-201ENST00000266679 DPF1Q92782 380 aa9.73□□□□□ -0.85
CPSF6-201ENST00000266679 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
CPSF6-201ENST00000266679 TAX1BP3O14907 124 aa9.71□□□□□ -0.85
CPSF6-201ENST00000266679 PRSS1P07477 247 aa9.71□□□□□ -0.85
CPSF6-201ENST00000266679 NMUP48645 174 aa9.71□□□□□ -0.85
CPSF6-201ENST00000266679 ATRQ13535 2644 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 A0A096LNT2 108 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 CBY3A6NI87 242 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 CD5LO43866 347 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 TGFAP01135 160 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 PSMB8P28062 276 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 ODF1Q14990 250 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 MRAP2Q96G30 205 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 PHLDA3Q9Y5J5 127 aa9.71□□□□□ -0.86
CPSF6-201ENST00000266679 RNF223E7ERA6 249 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 GNRH2O43555 120 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 MGPP08493 103 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 LAGE3Q14657 143 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 FBN1P35555 2871 aaKnown RBP9.7□□□□□ -0.86
CPSF6-201ENST00000266679 INAFM1C9JVW0 142 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 CCL25O15444 150 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 SMIM17P0DL12 118 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 BOD1L2Q8IYS8 172 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 DEFB125Q8N687 156 aa9.7□□□□□ -0.86
CPSF6-201ENST00000266679 C14orf178Q8N769 122 aaPredicted RBP9.7□□□□□ -0.86
CPSF6-201ENST00000266679 MXRA5Q9NR99 2828 aa9.69□□□□□ -0.86
CPSF6-201ENST00000266679 C7orf71A4D174 169 aa9.69□□□□□ -0.86
CPSF6-201ENST00000266679 K7EMT4 169 aa9.69□□□□□ -0.86
CPSF6-201ENST00000266679 PCP2Q8IVA1 136 aa9.69□□□□□ -0.86
CPSF6-201ENST00000266679 SMIM2Q9BVW6 85 aa9.69□□□□□ -0.86
CPSF6-201ENST00000266679 DPH3P1Q9H4G8 78 aa9.69□□□□□ -0.86
CPSF6-201ENST00000266679 PRSS47A8MTI9 375 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 ID1P41134 155 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 VAMP3Q15836 100 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 TMEM97Q5BJF2 176 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
CPSF6-201ENST00000266679 ZNF580Q9UK33 172 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 ATP5LO75964 103 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 KRTAP1-1Q07627 177 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 UBE2V1Q13404 147 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 DCANP1Q8TF63 244 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 COL6A5A8TX70 2615 aa9.68□□□□□ -0.86
CPSF6-201ENST00000266679 J3QLI3 93 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 IGKCP01834 107 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 RNASE3P12724 160 aaKnown RBP9.67□□□□□ -0.86
CPSF6-201ENST00000266679 MYOZ3Q8TDC0 251 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 RASL10AQ92737 203 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 ZMAT4Q9H898 229 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 ZNF688P0C7X2 276 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
CPSF6-201ENST00000266679 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 TRBV7-9A0A0J9YWB2 115 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 DPM2O94777 84 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 KRTAP21-3Q3LHN1 58 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 PRIMA1Q86XR5 153 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 OR9G4Q8NGQ1 327 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 AP1S3Q96PC3 154 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 KLLNB2CW77 178 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 SUMO2P61956 95 aaKnown RBP9.66□□□□□ -0.86
CPSF6-201ENST00000266679 GTSCR1Q86UQ5 136 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 TMEM160Q9NX00 188 aa9.66□□□□□ -0.86
CPSF6-201ENST00000266679 MUC4Q99102 2169 aa9.65□□□□□ -0.86
CPSF6-201ENST00000266679 TRAV12-3A0A0B4J271 114 aa9.65□□□□□ -0.86
CPSF6-201ENST00000266679 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
CPSF6-201ENST00000266679 TTTY13Q9BZ97 58 aa9.65□□□□□ -0.86
CPSF6-201ENST00000266679 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.86
CPSF6-201ENST00000266679 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.86
CPSF6-201ENST00000266679 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
CPSF6-201ENST00000266679 SYNJ2BPP57105 145 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 HSD52Q0P140 79 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 IGHV4OR15-8A0A075B7B6 117 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 A0A087WW49 117 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 IGHV4-31P0DP07 118 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 SEC11AP67812 179 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 ZC2HC1BQ5TFG8 222 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 SAMD13Q5VXD3 122 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 DUX5Q96PT3 197 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 ZNF702PQ9H963 129 aa9.64□□□□□ -0.87
CPSF6-201ENST00000266679 SIVA1O15304 175 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms