RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MYO9AB2RTY4 2548 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.53
CASC3-201ENST00000264645 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.53
CASC3-201ENST00000264645 TEX22C9J3V5 150 aa11.71□□□□□ -0.53
CASC3-201ENST00000264645 CRPP02741 224 aa11.71□□□□□ -0.53
CASC3-201ENST00000264645 XGP55808 180 aa11.71□□□□□ -0.54
CASC3-201ENST00000264645 NDUFV3P56181 108 aaKnown RBP11.71□□□□□ -0.54
CASC3-201ENST00000264645 OVOL3O00110 214 aa11.71□□□□□ -0.54
CASC3-201ENST00000264645 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
CASC3-201ENST00000264645 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
CASC3-201ENST00000264645 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
CASC3-201ENST00000264645 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
CASC3-201ENST00000264645 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 MINOS1Q5TGZ0 78 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 MINOS1-NBL1R4GNA1 71 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 TRGV11A0A075B6L2 103 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 TRBV6-1A0A0K0K1D8 114 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 FAM110DQ8TAY7 271 aaPredicted RBP11.7□□□□□ -0.54
CASC3-201ENST00000264645 ACACBO00763 2458 aa11.7□□□□□ -0.54
CASC3-201ENST00000264645 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 RBAKDNA6NC62 111 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 CTSGP08311 255 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 PAX4O43316 350 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 THBDP07204 575 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 MRPL23Q16540 153 aaKnown RBP11.69□□□□□ -0.54
CASC3-201ENST00000264645 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 FAM215AQ9Y5M1 114 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 TRAV12-2A0A075B6T6 113 aa11.69□□□□□ -0.54
CASC3-201ENST00000264645 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
CASC3-201ENST00000264645 BRD3OSQ6XYD6 125 aa11.68□□□□□ -0.54
CASC3-201ENST00000264645 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
CASC3-201ENST00000264645 M0R1W7 72 aa11.68□□□□□ -0.54
CASC3-201ENST00000264645 C8orf31Q8N9H6 132 aa11.68□□□□□ -0.54
CASC3-201ENST00000264645 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 SAA4P35542 130 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 SPINK13Q1W4C9 94 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 Q8N1Y9 231 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 I3L3M4 83 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 IGHG4P01861 327 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
CASC3-201ENST00000264645 RASL10AQ92737 203 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 LEPROTO15243 131 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 BUB3O43684 328 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 DKK4Q9UBT3 224 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 IGLV11-55A0A075B6I3 123 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 DEFB1P60022 68 aa11.66□□□□□ -0.54
CASC3-201ENST00000264645 CPAMD8Q8IZJ3 1885 aa11.65□□□□□ -0.54
CASC3-201ENST00000264645 TRACP01848 142 aa11.65□□□□□ -0.55
CASC3-201ENST00000264645 IGHV3-38A0A0C4DH36 116 aa11.64□□□□□ -0.55
CASC3-201ENST00000264645 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
CASC3-201ENST00000264645 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
CASC3-201ENST00000264645 Q6ZS92 163 aa11.64□□□□□ -0.55
CASC3-201ENST00000264645 Q71RC1 249 aaPredicted RBP11.64□□□□□ -0.55
CASC3-201ENST00000264645 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
CASC3-201ENST00000264645 SYNJ2BPP57105 145 aa11.64□□□□□ -0.55
CASC3-201ENST00000264645 CLEC2BQ92478 149 aa11.64□□□□□ -0.55
CASC3-201ENST00000264645 ICOSQ9Y6W8 199 aa11.63□□□□□ -0.55
CASC3-201ENST00000264645 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
CASC3-201ENST00000264645 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
CASC3-201ENST00000264645 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
CASC3-201ENST00000264645 DAND5Q8N907 189 aa11.63□□□□□ -0.55
CASC3-201ENST00000264645 CHCHD5Q9BSY4 110 aa11.63□□□□□ -0.55
CASC3-201ENST00000264645 MUC22E2RYF6 1773 aaPredicted RBP11.63□□□□□ -0.55
CASC3-201ENST00000264645 IGHV3-16A0A0C4DH30 117 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 IGLV1-47P01700 117 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 IGHV3-53P01767 116 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 U3KQK5 164 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 PIFOQ8TCI5 191 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 RNF185Q96GF1 192 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 TLN1Q9Y490 2541 aaKnown RBP11.62□□□□□ -0.55
CASC3-201ENST00000264645 H3BUX3 64 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 ATP5J2P56134 94 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 OPRPNQ99935 248 aaPredicted RBP11.62□□□□□ -0.55
CASC3-201ENST00000264645 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
CASC3-201ENST00000264645 BAALC-AS2P0C853 105 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 CACNA1AO00555 2505 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 A0A096LNJ9 63 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 FANCD2OSQ96PS1 177 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 TMEM126AQ9H061 195 aa11.61□□□□□ -0.55
CASC3-201ENST00000264645 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
CASC3-201ENST00000264645 CCDC179H3BU77 68 aa11.6□□□□□ -0.55
CASC3-201ENST00000264645 MSRB2Q9Y3D2 182 aa11.6□□□□□ -0.55
CASC3-201ENST00000264645 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
CASC3-201ENST00000264645 A0A0J9YY99 117 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 TINCRA0A1B0GVN0 87 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 FAM223BA6NKX1 122 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 290.9 ms