RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 DUSP14O95147 198 aaKnown RBP9.91□□□□□ -0.82
SNX1-201ENST00000261889 Q8N8P6 123 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 TNFRSF14Q92956 283 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 BBC3Q96PG8 261 aaPredicted RBP9.91□□□□□ -0.82
SNX1-201ENST00000261889 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 CEACAM3P40198 252 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 GAGE13Q4V321 117 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 FOXI2Q6ZQN5 318 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 Q8N9W7 124 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 GATD1Q8NB37 220 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 F5H697 171 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 SAA4P35542 130 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
SNX1-201ENST00000261889 MXRA5Q9NR99 2828 aa9.9□□□□□ -0.82
SNX1-201ENST00000261889 ADARB2-AS1A8MUL3 147 aa9.89□□□□□ -0.83
SNX1-201ENST00000261889 Q6ZS46 218 aa9.89□□□□□ -0.83
SNX1-201ENST00000261889 SYT8Q8NBV8 401 aa9.89□□□□□ -0.83
SNX1-201ENST00000261889 RAX2Q96IS3 184 aa9.89□□□□□ -0.83
SNX1-201ENST00000261889 ZFAND3Q9H8U3 227 aa9.89□□□□□ -0.83
SNX1-201ENST00000261889 TRBV6-1A0A0K0K1D8 114 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 E9PLD3 99 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 BEX4Q9NWD9 120 aaPredicted RBP9.88□□□□□ -0.83
SNX1-201ENST00000261889 ZNF256Q9Y2P7 627 aaPredicted RBP9.88□□□□□ -0.83
SNX1-201ENST00000261889 LGALS1P09382 135 aaKnown RBP9.88□□□□□ -0.83
SNX1-201ENST00000261889 FHL3Q13643 280 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 ZNF580Q9UK33 172 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 A0A087WX48 190 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 PRM2P04554 102 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 NFE4Q86UQ8 179 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 RASL10AQ92737 203 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 TIMD4Q96H15 378 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 ZMAT4Q9H898 229 aa9.88□□□□□ -0.83
SNX1-201ENST00000261889 SIVA1O15304 175 aa9.87□□□□□ -0.83
SNX1-201ENST00000261889 NPC2P61916 151 aa9.87□□□□□ -0.83
SNX1-201ENST00000261889 MORN3Q6PF18 240 aaPredicted RBP9.87□□□□□ -0.83
SNX1-201ENST00000261889 C1orf122Q6ZSJ8 110 aa9.87□□□□□ -0.83
SNX1-201ENST00000261889 RAB9AP51151 201 aa9.87□□□□□ -0.83
SNX1-201ENST00000261889 RNASE13Q5GAN3 156 aaKnown RBP9.87□□□□□ -0.83
SNX1-201ENST00000261889 NPBQ8NG41 125 aa9.87□□□□□ -0.83
SNX1-201ENST00000261889 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 PRTN3P24158 256 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 LINC01559Q495D7 138 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 TMEM170BQ5T4T1 132 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 SPOCK3Q9BQ16 436 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 MT-ATP8P03928 68 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 RRN3P1Q2M238 152 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 OR11H6Q8NGC7 330 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 PSMG3-AS1Q96PY0 264 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
SNX1-201ENST00000261889 SRSF1Q07955 248 aaKnown RBP eCLIP9.86□□□□□ -0.83
SNX1-201ENST00000261889 TMEM95Q3KNT9 176 aa9.86□□□□□ -0.83
SNX1-201ENST00000261889 MYMXA0A1B0GTQ4 84 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 ATP5LO75964 103 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
SNX1-201ENST00000261889 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 METTL26Q96S19 204 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 FN1P02751 2386 aaKnown RBP9.85□□□□□ -0.83
SNX1-201ENST00000261889 IGHV3-73A0A0B4J1V6 119 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 NDUFS8O00217 210 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 GATA3P23771 443 aa9.85□□□□□ -0.83
SNX1-201ENST00000261889 UBR5O95071 2799 aaPredicted RBP9.85□□□□□ -0.83
SNX1-201ENST00000261889 HOXA3O43365 443 aaPredicted RBP9.84□□□□□ -0.83
SNX1-201ENST00000261889 BAALCQ8WXS3 180 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 C11orf86A6NJI1 115 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 F8VRH5 84 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 ODF3BA8MYP8 253 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 BPESC1Q9GZL8 116 aa9.84□□□□□ -0.83
SNX1-201ENST00000261889 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 ADORA2A-AS1P86434 159 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 ZNF843Q8N446 348 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 LY6G5BQ8NDX9 201 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 TP53TG1Q9Y2A0 90 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 H7C1H1 209 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 SCGB1C2P0DMR2 95 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 CKS1BP61024 79 aa9.83□□□□□ -0.84
SNX1-201ENST00000261889 PRRC2AP48634 2157 aaKnown RBP9.82□□□□□ -0.84
SNX1-201ENST00000261889 TRAV12-3A0A0B4J271 114 aa9.82□□□□□ -0.84
SNX1-201ENST00000261889 CRIP2P52943 208 aaPredicted RBP9.82□□□□□ -0.84
SNX1-201ENST00000261889 DUX5Q96PT3 197 aa9.82□□□□□ -0.84
SNX1-201ENST00000261889 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
SNX1-201ENST00000261889 MTORP42345 2549 aa9.82□□□□□ -0.84
SNX1-201ENST00000261889 TSPAN13O95857 204 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 TRPT1Q86TN4 253 aaKnown RBP9.81□□□□□ -0.84
SNX1-201ENST00000261889 C10orf99Q6UWK7 81 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 RNF5Q99942 180 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 CNFNQ9BYD5 112 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 PRO0461Q9UI25 63 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 KLK9Q9UKQ9 250 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms