RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 G3V318 75 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 TRBV12-3P01733 135 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 RP1L1Q8IWN7 2480 aaPredicted RBP8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 SPRY2O43597 315 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 MSRB1Q9NZV6 116 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 C2orf70A6NJV1 201 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 BUB3O43684 328 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 AGPAT4-IT1Q9H0P7 198 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 ZNF318Q5VUA4 2279 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 LECT2O14960 151 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 RNF152Q8N8N0 203 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 VPREB3Q9UKI3 123 aa8.41□□□□□ -1.06
SLC6A4-201ENST00000261707 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
SLC6A4-201ENST00000261707 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
SLC6A4-201ENST00000261707 KMT2EQ8IZD2 1858 aa8.4□□□□□ -1.06
SLC6A4-201ENST00000261707 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
SLC6A4-201ENST00000261707 LINC00311Q8N616 119 aa8.4□□□□□ -1.07
SLC6A4-201ENST00000261707 PROP1O75360 226 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 NDUFA7O95182 113 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 Q8TCH9 128 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 DENND4AQ7Z401 1863 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 PLXNA1Q9UIW2 1896 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 GREB1LQ9C091 1923 aaPredicted RBP8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 TRPM7Q96QT4 1865 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 DIAPH2-AS1Q14236 149 aa8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 NOP10Q9NPE3 64 aaKnown RBP8.39□□□□□ -1.07
SLC6A4-201ENST00000261707 LCTP09848 1927 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 TPRP12270 2363 aaKnown RBP8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 CCDC179H3BU77 68 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 IGLV3-1P01715 115 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 C1orf195Q5TG92 126 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 CACNA1BQ00975 2339 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 SCN5AQ14524 2016 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 ESPL1Q14674 2120 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 IGHV7-4-1A0A0J9YVY3 117 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 CXCL5P42830 114 aa8.38□□□□□ -1.07
SLC6A4-201ENST00000261707 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 WFDC11Q8NEX6 87 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 BRCA1P38398 1863 aaKnown RBP8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 SEC16AO15027 2179 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 TMEM256-PLSCR3K7ERE1 68 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 NRGNQ92686 78 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 LENEPQ9Y5L5 61 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 TNRC6AQ8NDV7 1962 aaKnown RBP8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 M0QXV9 152 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 NCR3O14931 201 aa8.37□□□□□ -1.07
SLC6A4-201ENST00000261707 COL4A5P29400 1685 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 WDR90Q96KV7 1748 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 ELANEP08246 267 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 RSPO1Q2MKA7 263 aaPredicted RBP8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 HIST2H2BCQ6DN03 193 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 UBE2D4Q9Y2X8 147 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 WI2-2373I1.2A0A1W2PRP0 233 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 INAFM1C9JVW0 142 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
SLC6A4-201ENST00000261707 DEFB136Q30KP8 78 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 ABCA4P78363 2273 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 HILS1P60008 231 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 PATE2Q6UY27 113 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 LYPD6Q86Y78 171 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 LRRC75A-AS1Q8N1F1 130 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 LOXP28300 417 aaPredicted RBP8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
SLC6A4-201ENST00000261707 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 GYPEP15421 78 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 COL11A2P13942 1736 aaPredicted RBP8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 NDUFB1O75438 58 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 CTRLP40313 264 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 ZNF524Q96C55 264 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 C14orf177Q52M58 125 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 FANCMQ8IYD8 2048 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 FAM167A-AS1Q96KT0 104 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 AHCTF1Q8WYP5 2266 aa8.34□□□□□ -1.07
SLC6A4-201ENST00000261707 C17orf82Q86X59 251 aaPredicted RBP8.34□□□□□ -1.08
SLC6A4-201ENST00000261707 C11orf45Q8TAV5 145 aa8.34□□□□□ -1.08
SLC6A4-201ENST00000261707 FAM110AQ9BQ89 295 aa8.34□□□□□ -1.08
SLC6A4-201ENST00000261707 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 IGHV1-58A0A0C4DH39 117 aa8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 LOXL1Q08397 574 aaPredicted RBP8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 DAZ2Q13117 558 aaKnown RBP8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 MIAQ16674 131 aa8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 DAZ4Q86SG3 579 aaKnown RBP8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 ESM1Q9NQ30 184 aa8.33□□□□□ -1.08
SLC6A4-201ENST00000261707 DAZ3Q9NR90 486 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms