RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 DUSP14O95147 198 aaKnown RBP16.59■□□□□ 0.25
SIX3-201ENST00000260653 LEPP41159 167 aa16.59■□□□□ 0.25
SIX3-201ENST00000260653 ZNF493Q6ZR52 646 aa16.59■□□□□ 0.25
SIX3-201ENST00000260653 OR10D4PQ8NGN7 298 aa16.59■□□□□ 0.25
SIX3-201ENST00000260653 TEP1Q99973 2627 aaKnown RBP16.59■□□□□ 0.25
SIX3-201ENST00000260653 OR4C46A6NHA9 309 aa16.59■□□□□ 0.25
SIX3-201ENST00000260653 SPINK13Q1W4C9 94 aa16.59■□□□□ 0.25
SIX3-201ENST00000260653 TRAV12-3A0A0B4J271 114 aa16.58■□□□□ 0.25
SIX3-201ENST00000260653 H3BVH4 76 aa16.58■□□□□ 0.25
SIX3-201ENST00000260653 SAP30O75446 220 aa16.58■□□□□ 0.25
SIX3-201ENST00000260653 AMTNQ6UX39 209 aa16.58■□□□□ 0.25
SIX3-201ENST00000260653 OR10AG1Q8NH19 301 aa16.58■□□□□ 0.25
SIX3-201ENST00000260653 ATRQ13535 2644 aa16.58■□□□□ 0.25
SIX3-201ENST00000260653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.58■□□□□ 0.24
SIX3-201ENST00000260653 TRAV25A0A0B4J276 109 aa16.57■□□□□ 0.24
SIX3-201ENST00000260653 C7orf71A4D174 169 aa16.57■□□□□ 0.24
SIX3-201ENST00000260653 HLA-DRB4P13762 266 aa16.57■□□□□ 0.24
SIX3-201ENST00000260653 HLA-DRB4X5D2U9 266 aa16.57■□□□□ 0.24
SIX3-201ENST00000260653 K7EP13 123 aa16.56■□□□□ 0.24
SIX3-201ENST00000260653 AMN1Q8IY45 258 aa16.56■□□□□ 0.24
SIX3-201ENST00000260653 TIMM8BQ9Y5J9 83 aaPredicted RBP16.56■□□□□ 0.24
SIX3-201ENST00000260653 CYSRT1A8MQ03 144 aa16.56■□□□□ 0.24
SIX3-201ENST00000260653 H3BMM0 161 aa16.55■□□□□ 0.24
SIX3-201ENST00000260653 GNRH2O43555 120 aa16.55■□□□□ 0.24
SIX3-201ENST00000260653 SNAI2O43623 268 aa16.55■□□□□ 0.24
SIX3-201ENST00000260653 ZNF324O75467 553 aaPredicted RBP16.55■□□□□ 0.24
SIX3-201ENST00000260653 OR5AL1P0C617 328 aa16.55■□□□□ 0.24
SIX3-201ENST00000260653 ODF3L2Q3SX64 289 aa16.55■□□□□ 0.24
SIX3-201ENST00000260653 TSPOP30536 169 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 FAM104BQ5XKR9 115 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 SPRY2O43597 315 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 ESDP10768 282 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 ASIPP42127 132 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 FXYD7P58549 80 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 TMEM18Q96B42 140 aa16.54■□□□□ 0.24
SIX3-201ENST00000260653 VWFP04275 2813 aa16.53■□□□□ 0.24
SIX3-201ENST00000260653 S100A4P26447 101 aaKnown RBP16.53■□□□□ 0.24
SIX3-201ENST00000260653 RBMY1BA6NDE4 496 aaKnown RBP16.53■□□□□ 0.24
SIX3-201ENST00000260653 RBMY1EA6NEQ0 496 aaKnown RBP16.53■□□□□ 0.24
SIX3-201ENST00000260653 RBMY1DP0C7P1 496 aaKnown RBP16.53■□□□□ 0.24
SIX3-201ENST00000260653 FAM159AQ6UWV7 190 aa16.53■□□□□ 0.24
SIX3-201ENST00000260653 TMEM191AQ9H0A3 160 aa16.53■□□□□ 0.24
SIX3-201ENST00000260653 PF4P02776 101 aa16.52■□□□□ 0.24
SIX3-201ENST00000260653 VPS25Q9BRG1 176 aa16.52■□□□□ 0.24
SIX3-201ENST00000260653 A8MTW9 85 aa16.52■□□□□ 0.23
SIX3-201ENST00000260653 SPANXN1Q5VSR9 72 aa16.52■□□□□ 0.23
SIX3-201ENST00000260653 IGLV1-51P01701 117 aa16.51■□□□□ 0.23
SIX3-201ENST00000260653 KCNS1Q96KK3 526 aa16.51■□□□□ 0.23
SIX3-201ENST00000260653 RNASE3P12724 160 aaKnown RBP16.51■□□□□ 0.23
SIX3-201ENST00000260653 MRPL51Q4U2R6 128 aaKnown RBP16.5■□□□□ 0.23
SIX3-201ENST00000260653 D6R8Y8 96 aa16.5■□□□□ 0.23
SIX3-201ENST00000260653 PTTG1IPP53801 180 aa16.5■□□□□ 0.23
SIX3-201ENST00000260653 LINC00482Q8N8I6 264 aa16.5■□□□□ 0.23
SIX3-201ENST00000260653 ZNF664Q8N3J9 261 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 NOTCH3Q9UM47 2321 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 IGHV4-4A0A075B6R2 117 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 CD7P09564 240 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 EVI2AP22794 236 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 CACNG7P62955 275 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 RNF185Q96GF1 192 aa16.49■□□□□ 0.23
SIX3-201ENST00000260653 M0R381 172 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 CRXO43186 299 aaPredicted RBP16.48■□□□□ 0.23
SIX3-201ENST00000260653 TDRG1Q3Y452 100 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 URB1-AS1Q96HZ7 61 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 SAMD10Q9BYL1 202 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 SCRT2Q9NQ03 307 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 RBMY1A1P0DJD3 496 aaKnown RBP16.48■□□□□ 0.23
SIX3-201ENST00000260653 RBMY1CP0DJD4 496 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 RBMY1FQ15415 496 aaKnown RBP16.48■□□□□ 0.23
SIX3-201ENST00000260653 PHLDA3Q9Y5J5 127 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 MUC4Q99102 2169 aa16.48■□□□□ 0.23
SIX3-201ENST00000260653 MED14OSP0DP75 135 aa16.47■□□□□ 0.23
SIX3-201ENST00000260653 RNASEKQ6P5S7 137 aaKnown RBP16.47■□□□□ 0.23
SIX3-201ENST00000260653 U3KQK5 164 aa16.47■□□□□ 0.23
SIX3-201ENST00000260653 OR11H12B2RN74 326 aa16.47■□□□□ 0.23
SIX3-201ENST00000260653 SMKR1H3BMG3 65 aa16.47■□□□□ 0.23
SIX3-201ENST00000260653 PMCHP20382 165 aa16.47■□□□□ 0.23
SIX3-201ENST00000260653 NCR2O95944 276 aa16.46■□□□□ 0.22
SIX3-201ENST00000260653 NIT1Q86X76 327 aa16.46■□□□□ 0.22
SIX3-201ENST00000260653 ORMDL3Q8N138 153 aa16.46■□□□□ 0.22
SIX3-201ENST00000260653 FAM19A2Q8N3H0 131 aa16.46■□□□□ 0.22
SIX3-201ENST00000260653 IGHV1OR15-1A0A075B7D0 117 aa16.45■□□□□ 0.22
SIX3-201ENST00000260653 AMTP48728 403 aa16.45■□□□□ 0.22
SIX3-201ENST00000260653 PRELID3AQ96N28 172 aa16.45■□□□□ 0.22
SIX3-201ENST00000260653 Q8N1Y9 231 aa16.45■□□□□ 0.22
SIX3-201ENST00000260653 CITED1Q99966 193 aa16.45■□□□□ 0.22
SIX3-201ENST00000260653 CKS2P33552 79 aa16.44■□□□□ 0.22
SIX3-201ENST00000260653 GAS8-AS1O95177 125 aa16.44■□□□□ 0.22
SIX3-201ENST00000260653 SHISA2Q6UWI4 295 aa16.44■□□□□ 0.22
SIX3-201ENST00000260653 SPATA3Q8NHX4 192 aa16.44■□□□□ 0.22
SIX3-201ENST00000260653 ZNF479Q96JC4 524 aa16.44■□□□□ 0.22
SIX3-201ENST00000260653 MDFICQ9P1T7 246 aa16.43■□□□□ 0.22
SIX3-201ENST00000260653 IGHV3-16A0A0C4DH30 117 aa16.43■□□□□ 0.22
SIX3-201ENST00000260653 C20orf202A1L168 122 aa16.43■□□□□ 0.22
SIX3-201ENST00000260653 HSBP1O75506 76 aa16.43■□□□□ 0.22
SIX3-201ENST00000260653 STHQ8IWL8 128 aa16.43■□□□□ 0.22
SIX3-201ENST00000260653 OR2K2Q8NGT1 345 aa16.43■□□□□ 0.22
SIX3-201ENST00000260653 Q6ZWC4 215 aa16.42■□□□□ 0.22
SIX3-201ENST00000260653 WFDC10AQ9H1F0 79 aa16.42■□□□□ 0.22
SIX3-201ENST00000260653 NPYP01303 97 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms