RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 DTX2Q86UW9 622 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
SOX9-201ENST00000245479 TMEM14CQ9P0S9 112 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 K7ENP7 123 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 EGR2P11161 476 aaPredicted RBP9.03□□□□□ -0.96
SOX9-201ENST00000245479 PDE6HQ13956 83 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 C14orf178Q8N769 122 aaPredicted RBP9.03□□□□□ -0.96
SOX9-201ENST00000245479 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 LINC01548A6NM66 108 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 CEACAM4O75871 244 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 UFSP1Q6NVU6 142 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 OR11H6Q8NGC7 330 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 TRAV12-3A0A0B4J271 114 aa9.02□□□□□ -0.96
SOX9-201ENST00000245479 C2orf82Q6UX34 121 aa9.02□□□□□ -0.96
SOX9-201ENST00000245479 RNF183Q96D59 192 aa9.02□□□□□ -0.96
SOX9-201ENST00000245479 FGF6P10767 208 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 FAM159AQ6UWV7 190 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 SLC50A1Q9BRV3 221 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 HECTD1Q9ULT8 2610 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 IGKV1D-37A0A075B6S9 117 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 ODF1Q14990 250 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.97
SOX9-201ENST00000245479 A0A087WX48 190 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 IGLV2-23P01705 113 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 IFITM1P13164 125 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 DYNAPQ8N1N2 210 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 SLC25A20O43772 301 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 TMEM190Q8WZ59 177 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 ATP5J2P56134 94 aa9.01□□□□□ -0.97
SOX9-201ENST00000245479 IGKV1-17P01599 117 aa9□□□□□ -0.97
SOX9-201ENST00000245479 MT-ATP8P03928 68 aa9□□□□□ -0.97
SOX9-201ENST00000245479 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
SOX9-201ENST00000245479 TCTEX1D4Q5JR98 221 aa9□□□□□ -0.97
SOX9-201ENST00000245479 ZFP36P26651 326 aaKnown RBP9□□□□□ -0.97
SOX9-201ENST00000245479 SAA4P35542 130 aa9□□□□□ -0.97
SOX9-201ENST00000245479 H3BRN7 92 aa9□□□□□ -0.97
SOX9-201ENST00000245479 NPC2P61916 151 aa9□□□□□ -0.97
SOX9-201ENST00000245479 SIGLEC15Q6ZMC9 328 aa9□□□□□ -0.97
SOX9-201ENST00000245479 NTN5Q8WTR8 489 aaPredicted RBP9□□□□□ -0.97
SOX9-201ENST00000245479 PTPRBP23467 1997 aa9□□□□□ -0.97
SOX9-201ENST00000245479 C5orf64Q2M2E5 130 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 TEN1Q86WV5 123 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 E9PLD3 99 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 PRB1P04280 392 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
SOX9-201ENST00000245479 ATXN8Q156A1 80 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 PRO1854Q9UHT4 67 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 TRGV3P03979 118 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 IL17RELQ6ZVW7 336 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 ZNF491Q8N8L2 437 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 CFAP46Q8IYW2 2715 aa8.99□□□□□ -0.97
SOX9-201ENST00000245479 CSMD2Q7Z408 3487 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 INSL3P51460 131 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 CIRBPQ14011 172 aaKnown RBP8.98□□□□□ -0.97
SOX9-201ENST00000245479 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 DPH3P1Q9H4G8 78 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 TRAV21A0A0B4J279 112 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 ATP6V0E1O15342 81 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 Q6ZUT4 128 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 RAI1Q7Z5J4 1906 aaPredicted RBP8.98□□□□□ -0.97
SOX9-201ENST00000245479 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
SOX9-201ENST00000245479 EEF1AKMT3Q96AZ1 226 aa8.98□□□□□ -0.97
SOX9-201ENST00000245479 TNRC6BQ9UPQ9 1833 aaKnown RBP8.97□□□□□ -0.97
SOX9-201ENST00000245479 MEIG1Q5JSS6 88 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 KLHL30-AS1Q8NEE0 82 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 A0A0U1RRA0 63 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 F6UB75 175 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 ADORA2A-AS1P86434 159 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 C15orf53Q8NAA6 179 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 C7orf69Q9H7B7 122 aa8.97□□□□□ -0.97
SOX9-201ENST00000245479 H3BMM0 161 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 M0R2P5 195 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 UBE2WQ96B02 151 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 K7EIM0 57 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 Q6ZQT7 251 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 LINC00477Q96M19 166 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 TP53TG1Q9Y2A0 90 aa8.96□□□□□ -0.98
SOX9-201ENST00000245479 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 A0A1W2PPR1 153 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 PRAC2D3DTV9 90 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 CD7P09564 240 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 TM2D2Q9BX73 214 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 IGKV3D-20A0A0C4DH25 116 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 IGLV1-47P01700 117 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 CR1LQ2VPA4 569 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 C9orf153Q5TBE3 101 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 C3orf56Q8N813 242 aa8.95□□□□□ -0.98
SOX9-201ENST00000245479 AGRNO00468 2067 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 ID1P41134 155 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 HERV-K104P63124 156 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 CHD6Q8TD26 2715 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 C19orf84I3L1E1 186 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 DNAL4O96015 105 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 H3BUX3 64 aa8.94□□□□□ -0.98
SOX9-201ENST00000245479 ZFP2Q6ZN57 461 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms