RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 NPC2P61916 151 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CNBPP62633 177 aaKnown RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 UBA52P62987 128 aaKnown RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 EMX2Q04743 252 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 DEFB113Q30KQ7 82 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 PIGYQ3MUY2 71 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MORN2Q502X0 79 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 C9orf153Q5TBE3 101 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 C1orf134Q5TEV5 83 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MIC13Q5XKP0 118 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 RPL13AP3Q6NVV1 102 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 LYPD5Q6UWN5 251 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM91Q6ZNR0 172 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF818PQ6ZRF7 136 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 BAGE3Q86Y29 109 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 UBE2DNLQ8IWF7 75 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 Q8N2B8 174 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SMIM11BQ8TCY0 68 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ZC2HC1AQ96GY0 325 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 C12orf57Q99622 126 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MGST2Q99735 147 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 PRO1933Q9H354 126 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 Q9H521 79 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 FKBP11Q9NYL4 201 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 PSENENQ9NZ42 101 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SMPXQ9UHP9 88 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 V9GYH0 126 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SCN9AQ15858 1988 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SCN8AQ9UQD0 1980 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 RP1L1Q8IWN7 2480 aaPredicted RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 COL18A1P39060 1754 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 DSCAMO60469 2012 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 NINQ8N4C6 2090 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MGAMO43451 1857 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SMARCA4P51532 1647 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF106Q9H2Y7 1883 aaKnown RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 HEATR1Q9H583 2144 aaKnown RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MYO5AQ9Y4I1 1855 aaKnown RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 PLXND1Q9Y4D7 1925 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 ADGBQ8N7X0 1667 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 ICE1Q9Y2F5 2266 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SHANK2Q9UPX8 1470 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 HEATR5AQ86XA9 2040 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 LAMB4A4D0S4 1761 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MAST2Q6P0Q8 1798 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MYOFQ9NZM1 2061 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 HEATR5BQ9P2D3 2071 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 NUP98P52948 1817 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 FXYD6-FXYD2A0A087WZ82 144 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 TRAV13-2A0A0B4J235 113 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 TRAV12-3A0A0B4J271 114 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 UBE2L5PA0A1B0GUS4 154 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 A6NN06 94 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM14DPA8MWL7 114 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MIF4GDA9UHW6 222 aaKnown RBP0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SYS1-DBNDD2H3BUS1 97 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 NDUFC1O43677 76 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PPP1R17O96001 155 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MGPP08493 103 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 NBEAP1P0C6P0 100 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SPINK8P0C7L1 97 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 COX8AP10176 69 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 ACYP2P14621 99 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 S100PP25815 95 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 GNG4P50150 75 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 INSL3P51460 131 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 ROMO1P60602 79 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 S100A10P60903 97 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 RPS25P62851 125 aaKnown RBP0.3□□□□□ -2.36
CDKN3-201ENST00000216414 CCL8P80075 99 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SPAG11BQ08648 103 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 C9orf116Q5BN46 136 aaPredicted RBP0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MEIG1Q5JSS6 88 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 C10orf128Q5T292 105 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MRPL54Q6P161 138 aaKnown RBP0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SPAG11AQ6PDA7 123 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 C10orf99Q6UWK7 81 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SPINK6Q6UWN8 80 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 HRCT1Q6UXD1 115 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM14EPQ6UXP3 125 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF720Q7Z2F6 126 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 TTC9CQ8N5M4 171 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 C9orf163Q8N9P6 203 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SPTSSBQ8NFR3 76 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 FDCSPQ8NFU4 85 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 COX7B2Q8TF08 81 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 C10orf82Q8WW14 230 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PLAC4Q8WY50 150 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 USMG5Q96IX5 58 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 AMELXQ99217 191 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 CCL19Q99731 98 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 NABP2Q9BQ15 211 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 LIMD2Q9BT23 127 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 DPY30Q9C005 99 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 CYP4F30PQ9H0H9 118 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 TP73-AS1Q9UF72 201 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 C22orf24Q9Y442 160 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 SERP1Q9Y6X1 66 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 EIF4G3O43432 1585 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms