RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF493Q6ZR52 646 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 FER1L6-AS1Q8NA97 138 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 SAP30O75446 220 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 SPATA12Q7Z6I5 190 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 MAP6D1Q9H9H5 199 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 ZNF705AQ6ZN79 300 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-201ENST00000162749 GOLT1BQ9Y3E0 138 aa14.6□□□□□ -0.07
TNFRSF1A-201ENST00000162749 CBY1Q9Y3M2 126 aa14.6□□□□□ -0.07
TNFRSF1A-201ENST00000162749 MUC21A0A0G2JKD1 596 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 MUC21A0A140T8X8 626 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 DLEU1O43261 78 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 DUSP14O95147 198 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 SPATA45Q537H7 98 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 MUC21Q5SSG8 566 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 ATOH7Q8N100 152 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 TMEM208Q9BTX3 173 aa14.59□□□□□ -0.07
TNFRSF1A-201ENST00000162749 KNCNA6PVL3 124 aa14.58□□□□□ -0.07
TNFRSF1A-201ENST00000162749 LINC00173Q6ZV60 143 aa14.58□□□□□ -0.07
TNFRSF1A-201ENST00000162749 PF4P02776 101 aa14.58□□□□□ -0.08
TNFRSF1A-201ENST00000162749 HLA-DRB4P13762 266 aa14.58□□□□□ -0.08
TNFRSF1A-201ENST00000162749 MAJINQ3KP22 176 aa14.58□□□□□ -0.08
TNFRSF1A-201ENST00000162749 AMTNQ6UX39 209 aa14.58□□□□□ -0.08
TNFRSF1A-201ENST00000162749 HLA-DRB4X5D2U9 266 aa14.58□□□□□ -0.08
TNFRSF1A-201ENST00000162749 IGLV1-51P01701 117 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 CNFNQ9BYD5 112 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 FBN1P35555 2871 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 STAB1Q9NY15 2570 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 LEPP41159 167 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 CDKN1BP46527 198 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 ODF3L2Q3SX64 289 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 MRPL52Q86TS9 123 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 LINC00482Q8N8I6 264 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 CITED1Q99966 193 aa14.57□□□□□ -0.08
TNFRSF1A-201ENST00000162749 H3BMM0 161 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 GAGE1Q13065 139 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 C21orf62-AS1Q17RA5 79 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 SPINK13Q1W4C9 94 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 AMN1Q8IY45 258 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 TRAV12-2A0A075B6T6 113 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 ANXA2RQ3ZCQ2 193 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 FAM104BQ5XKR9 115 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 TMEM70Q9BUB7 260 aa14.56□□□□□ -0.08
TNFRSF1A-201ENST00000162749 TRAV12-3A0A0B4J271 114 aa14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 C7orf71A4D174 169 aa14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 A8MTW9 85 aa14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 CRXO43186 299 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 DMRTA1Q5VZB9 504 aa14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 U3KQK5 164 aa14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 MUC4Q99102 2169 aa14.55□□□□□ -0.08
TNFRSF1A-201ENST00000162749 LEPROTL1O95214 131 aa14.54□□□□□ -0.08
TNFRSF1A-201ENST00000162749 NPSP0C0P6 89 aa14.54□□□□□ -0.08
TNFRSF1A-201ENST00000162749 D6R8Y8 96 aa14.54□□□□□ -0.08
TNFRSF1A-201ENST00000162749 IGLC3P0DOY3 106 aa14.54□□□□□ -0.08
TNFRSF1A-201ENST00000162749 TSPOP30536 169 aa14.54□□□□□ -0.08
TNFRSF1A-201ENST00000162749 TWIST1Q15672 202 aa14.53□□□□□ -0.08
TNFRSF1A-201ENST00000162749 MSRB1Q9NZV6 116 aa14.53□□□□□ -0.08
TNFRSF1A-201ENST00000162749 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 SYS1-DBNDD2H3BUS1 97 aa14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 H3BVH4 76 aa14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 SNAI2O43623 268 aa14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 OR5AL1P0C617 328 aa14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 MRPL51Q4U2R6 128 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 OR10AG1Q8NH19 301 aa14.52□□□□□ -0.08
TNFRSF1A-201ENST00000162749 TRAV9-2A0A087WT02 112 aa14.51□□□□□ -0.09
TNFRSF1A-201ENST00000162749 OR2K2Q8NGT1 345 aa14.51□□□□□ -0.09
TNFRSF1A-201ENST00000162749 AP5S1Q9NUS5 200 aa14.51□□□□□ -0.09
TNFRSF1A-201ENST00000162749 GNRH2O43555 120 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 IFI27P40305 119 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 FAM159AQ6UWV7 190 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 OR11H12B2RN74 326 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 FXYD7P58549 80 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 ORMDL3Q8N138 153 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 PRSS3P2Q8NHM4 247 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 PRELID3AQ96N28 172 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 UQCR10Q9UDW1 63 aa14.5□□□□□ -0.09
TNFRSF1A-201ENST00000162749 IGLL1P15814 213 aa14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 ASIPP42127 132 aa14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 PCP4P48539 62 aa14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 SPATA3Q8NHX4 192 aa14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 COL6A5A8TX70 2615 aa14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 S100A4P26447 101 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 KRTAP24-1Q3LI83 254 aa14.49□□□□□ -0.09
TNFRSF1A-201ENST00000162749 LOC389332A0A1B0GUA5 103 aa14.48□□□□□ -0.09
TNFRSF1A-201ENST00000162749 RNASE3P12724 160 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-201ENST00000162749 FA2HQ7L5A8 372 aa14.48□□□□□ -0.09
TNFRSF1A-201ENST00000162749 RNF185Q96GF1 192 aa14.48□□□□□ -0.09
TNFRSF1A-201ENST00000162749 TMEM191AQ9H0A3 160 aa14.48□□□□□ -0.09
TNFRSF1A-201ENST00000162749 A0A096LNJ9 63 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 SMKR1H3BMG3 65 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 CD7P09564 240 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 BEAN1Q3B7T3 259 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 TIMM8BQ9Y5J9 83 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 IGHV4-4A0A075B6R2 117 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 RBMY1A1P0DJD3 496 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 RBMY1CP0DJD4 496 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 RBMY1FQ15415 496 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 SCRT2Q9NQ03 307 aa14.47□□□□□ -0.09
TNFRSF1A-201ENST00000162749 MED14OSP0DP75 135 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms