RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Cd55Q61475 390 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Ppp1r3cQ7TMB3 317 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm4894Q8CA09 118 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rpl7l1Q9D8M4 246 aaKnown RBP8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Slamf6Q9ET39 351 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Zfp979A2A799 407 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr64F8VPZ8 307 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Klrk1O54709 232 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 NpyP57774 97 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Defb4P82019 63 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 A930003A15RikQ3U552 87 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1474Q7TQQ8 314 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Il22ra1Q80XZ4 581 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Fam214bQ8BR27 538 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr498Q8VEW2 330 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr490Q8VFD2 314 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1459Q8VFV9 307 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr116Q923Q6 321 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Crybb3Q9JJU9 211 aa8.11□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Trav6-1A0A075B5Z8 112 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 2610044O15Rik8A0A087WRJ1 410 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm45785A0A1B0GT05 94 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Bet1lO35153 111 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tesk1O70146 627 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 P01659 112 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 PigyP0C1P0 71 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Wnt6P22727 364 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Twist1P26687 206 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1362Q5SZZ8 308 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tmem164Q6PHN7 296 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr481Q8VGI5 312 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Zdhhc16Q9ESG8 361 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Hspb8Q9JK92 196 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Ntn3Q9R1A3 580 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm20379A0A087WR34 119 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Mpig6bD7PDD4 242 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 CrxO54751 299 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 P01648 108 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tnfrsf1bP25119 474 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Srsf6Q3TWW8 339 aaKnown RBP8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Smim19Q80ZU4 107 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tmprss3Q8K1T0 453 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Vmn1r217Q8R270 298 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr502Q8VG09 314 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Vkorc1Q9CRC0 161 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Try5Q9QUK9 246 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Try4Q9R0T7 246 aa8.1□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm5741B2RVA4 72 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Obox6G3X9U1 347 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Syngr2O55101 224 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 CfpP11680 464 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Plk3Q60806 631 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tas2r120Q7M721 295 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1181Q7TR18 311 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gpbar1Q80SS6 329 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1350Q8VF34 308 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr982Q8VGB3 321 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Akirin1Q99LF1 191 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Mcrip2Q9CQB2 160 aaKnown RBP8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Wfdc2Q9DAU7 174 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Il36aQ9JLA2 160 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Mmp17Q9R0S3 578 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rabac1Q9Z0S9 185 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Ascc3E9PZJ8 2198 aaKnown RBP8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Zfp688E9Q5M9 274 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr177E9Q7W1 309 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm21913J3KML9 361 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm20825J3QM67 227 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm21776J3QPJ5 361 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Zfp36l2P23949 484 aaKnown RBP8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 GferP56213 198 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr18Q0VAX9 331 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Ssty2Q149W4 227 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm21394Q497R7 227 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm20854Q62461 227 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm9944Q8C559 102 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 GaptQ8CB93 157 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 9030612E09RikQ8CE20 140 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rpusd1Q8VCZ8 306 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1447Q8VFX3 309 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1239Q8VGM8 305 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rer1Q9CQU3 196 aaKnown RBP8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Adamts20P59511 1906 aa8.09□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rp1P56716 2095 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Trav16d-dv11A0A075B617 117 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Trav7n-4A0A075B620 113 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Trav16nA0A075B634 117 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Ighv1-18A0A0A6YXN4 117 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Igkv17-121A0A0G2JFA8 117 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Zfp976E9Q981 636 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Mpv17P19258 176 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Oprk1P33534 380 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Gfra1P97785 468 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Smrp1Q2MH31 260 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Klk1b24Q61754 263 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Wdr83osQ6ZWX0 106 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Mtch1Q791T5 389 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Vgll4Q80V24 287 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Ndfip1Q8R0W6 221 aa8.08□□□□□ -1.12
Hmgb1-201ENSMUST00000085546 Olfr1199Q8VF94 310 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms