RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Cst10Q9JM84 148 aa13.12□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gstp1P19157 210 aa13.12□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Rpl31P62900 125 aaKnown RBP13.12□□□□□ -0.31
Ckap4-201ENSMUST00000053871 AmelxP63277 210 aa13.12□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm10645Q3UPY1 145 aa13.12□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Nubp1Q9R060 320 aa13.12□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Tnfsf11O35235 316 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Pde6dO55057 150 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Kcnip4Q6PHZ8 250 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr822Q8VFU1 312 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Cmtm2bQ9DAC0 210 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Dscaml1Q4VA61 2053 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Trav17A0A075B655 113 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Nat8f7E0CYR6 227 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 ApcsP12246 224 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Btf3Q64152 204 aaKnown RBP13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 RfxapQ8VCG9 231 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Rhbdd2Q8VEK2 361 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr577Q8VH11 312 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 SmagpQ99KC7 97 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Tm2d1Q99MB3 208 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Anapc16Q9CPV2 110 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Zfp708F8VPP0 541 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Egr1P08046 533 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm10803Q3TZS6 135 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Zfp941Q3URY5 674 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Kazald1Q8BJ66 313 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Fhl4Q8CDC8 279 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr492Q8VFD1 314 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Ykt6Q9CQW1 198 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 TslpQ9JIE6 140 aa13.11□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Ahctf1Q8CJF7 2243 aaKnown RBP13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm21244J3QK38 227 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 P18532 116 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Cd81P35762 236 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Slc35b1P97858 322 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 StumQ0VBF8 141 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Crebl2Q32M00 123 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Vmn1r222Q8R269 308 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 BC053393A0A0B4J1F6 192 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Tnfaip6O08859 275 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Sfrp2P97299 295 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Sap30lQ5SQF8 182 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm10334Q792Y8 246 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr770Q8VGC2 311 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr1228Q8VGM9 323 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Vmn1r50Q9EP51 310 aa13.1□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm20825J3QM67 227 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Dynlt3P56387 116 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Tpt1P63028 172 aaKnown RBP13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Ssty2Q149W4 227 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 CenptQ3TJM4 515 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm21394Q497R7 227 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gm20854Q62461 227 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Scgb2b24Q7M747 112 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Fbxw26Q8BI58 466 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Tmem126bQ9D1R1 230 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr1458A0A1L1SSD5 307 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 CckarO08786 436 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gimap1P70224 277 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 1700009N14RikQ14AA6 216 aaKnown RBP13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Bex6Q3TZW7 114 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Rtl4Q3URY0 304 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Oraov1Q8CH62 137 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Scgb3a2Q920H1 91 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Lmntd1Q9D4C1 413 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Gpa33Q9JKA5 319 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Slurp1Q9Z0K7 110 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr1098A2AVB0 315 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr779E9PUS9 130 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 RhobP62746 196 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Megf9Q8BH27 600 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Vmn1r70Q8R254 298 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Olfr1457Q8VFK3 317 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Mpv17lQ99MS3 194 aa13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Sptan1P16546 2472 aaKnown RBP13.09□□□□□ -0.31
Ckap4-201ENSMUST00000053871 SonQ9QX47 2444 aaKnown RBP13.08□□□□□ -0.31
Ckap4-201ENSMUST00000053871 Tcf21O35437 179 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Mtnd6P03925 172 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Mex3bQ69Z36 601 aaKnown RBP13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Opn3Q9WUK7 400 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 CnmdQ9Z1F6 334 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Sptbn4E9PX29 2561 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Adgrg4B7ZCC9 3073 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Trav6d-3A0A075B6B3 112 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Vamp3P63024 103 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tmem40Q4FJU9 225 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Trav6-3Q5R1E6 112 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 NotoQ5TIS6 240 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Cbln1Q9R171 193 aa13.08□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm28171A0A087WQ19 227 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Trbv19A0A0B4J1H4 117 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Vmn1r78K7N608 313 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Mtco2P00405 227 aaKnown RBP13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P04212 136 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 S100a10P08207 97 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ccl11P48298 97 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1246Q7TQZ6 314 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Hapln4Q80WM4 400 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm4894Q8CA09 118 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 1498.2 ms