RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 PirtQ8BFY0 135 aa10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Zfp874aQ8BX23 447 aa10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Olfr1265Q8VEZ3 309 aa10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Olfr492Q8VFD1 314 aa10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Tmem126aQ9D8Y1 196 aa10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Eny2Q9JIX0 101 aaKnown RBP10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Gm12728V9GX31 77 aa10.35□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Trbv19A0A0B4J1H4 117 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Tm4sf19E9Q9H8 206 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 P04212 136 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Hist1h2bfP10853 126 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 RhobP62746 196 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Wfdc8Q4KUS1 273 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Hist1h2bbQ64475 126 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Hist1h2bkQ8CGP1 126 aaKnown RBP10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Hist1h2bpQ8CGP2 126 aaKnown RBP10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Ncor1Q60974 2453 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 AtrxQ61687 2476 aaKnown RBP10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Olfr1098A2AVB0 315 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Gm5093E9PZB3 174 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Olfr177E9Q7W1 309 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Rpl31P62900 125 aaKnown RBP10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Gm10803Q3TZS6 135 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Ms4a13Q5FWC3 203 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Tmem30bQ8BHG3 353 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 RetnlgQ8K426 117 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Olfr124Q8VGW6 315 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Mrpl41Q9CQN7 135 aaKnown RBP10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Tmem190Q9D2E9 166 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Gpa33Q9JKA5 319 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 SetxA2AKX3 2646 aa10.34□□□□□ -0.75
Rnf4-201ENSMUST00000030992 Hoxa1P09022 331 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Ccl2P10148 148 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Rpl27aP14115 148 aaKnown RBP10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Map6d1Q14BB9 191 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Zcchc10Q9CX48 178 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Ndufb10Q9DCS9 176 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Cml1Q9JIZ0 222 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Cst10Q9JM84 148 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr1016A2ASV2 309 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm14851Q5ERJ0 116 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Fxyd3Q61835 88 aa10.33□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr609E9Q4X7 319 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm21974F6W3F3 119 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 TcapO70548 167 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Sfrp2P97299 295 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Dtx1Q61010 627 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 COA4Q8BT51 87 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 CrhQ8CIT0 187 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr1475Q8VEV6 314 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr1445Q8VFW9 314 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Glrx2Q923X4 156 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 AmtnQ9D3J8 213 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm5239D3YYZ2 122 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 P01806 116 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr43Q7TRX1 313 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Ubald2Q8BQH4 164 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Q8CF25 301 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Commd9Q8K2Q0 198 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr1462Q8VFW3 307 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 4930583I09RikQ9D2E3 102 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Sh2d6Q9D413 297 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Rhox4bQ9JI43 205 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Shank1D3YZU1 2167 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Fcrl6A1YIY0 268 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm10020E9QAZ2 204 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm12169F2Z474 250 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 P01759 136 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Hoxb4P10284 250 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Bmp5P49003 452 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Dlx6P70397 175 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm10192Q3V0S1 108 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Sf3a2Q62203 475 aaKnown RBP10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Ubald1Q6P3B2 176 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Znrd1Q791N7 123 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr399Q7TRX3 311 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Il25Q8VHH8 169 aa10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Rpl15Q9CZM2 204 aaKnown RBP10.32□□□□□ -0.76
Rnf4-201ENSMUST00000030992 TncQ80YX1 2110 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Ighv5-9A0A075B5Q2 117 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Gm44501A8R0T9 150 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Vmn1r224E9PWK2 298 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr978E9Q985 311 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 P06323 132 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Il3raP26952 396 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Spam1P48794 512 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Kcnip4Q6PHZ8 250 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Fam78bQ8BQN5 261 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Slc17a9Q8VCL5 447 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Opn3Q9WUK7 400 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr1154L7MU57 310 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Adcyap1O70176 175 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 P01789 122 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Olfr1102Q8VES2 324 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Rpp25lQ99JH1 163 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Kcnmb2Q9CZM9 235 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Tmem183Q9JJB9 375 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 CompQ9R0G6 755 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Slurp1Q9Z0K7 110 aa10.31□□□□□ -0.76
Rnf4-201ENSMUST00000030992 Piezo1E2JF22 2547 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms