RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 MUC21A0A140T8X8 626 aa13□□□□□ -0.33
PHGDH-232ENST00000641947 DUSP14O95147 198 aaKnown RBP13□□□□□ -0.33
PHGDH-232ENST00000641947 CAMPP49913 170 aa13□□□□□ -0.33
PHGDH-232ENST00000641947 MUC21Q5SSG8 566 aa13□□□□□ -0.33
PHGDH-232ENST00000641947 TRAV21A0A0B4J279 112 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 RPS20P60866 119 aaKnown RBP12.99□□□□□ -0.33
PHGDH-232ENST00000641947 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-232ENST00000641947 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 CTRLP40313 264 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 RAB4BP61018 213 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 HBBP68871 147 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 SLAQ13239 276 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 WDR73Q6P4I2 378 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 NAGKQ9UJ70 344 aa12.99□□□□□ -0.33
PHGDH-232ENST00000641947 XKRY2A2RUG3 117 aa12.98□□□□□ -0.33
PHGDH-232ENST00000641947 LEPP41159 167 aa12.98□□□□□ -0.33
PHGDH-232ENST00000641947 FXYD7P58549 80 aa12.98□□□□□ -0.33
PHGDH-232ENST00000641947 RASL11AQ6T310 242 aa12.98□□□□□ -0.33
PHGDH-232ENST00000641947 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
PHGDH-232ENST00000641947 TRAV12-3A0A0B4J271 114 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 A0A1B0GUT8 65 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-232ENST00000641947 ANXA2RQ3ZCQ2 193 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 C7orf71A4D174 169 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 CD7P09564 240 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 CDKN1BP46527 198 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 SSTP61278 116 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 SNRPEP62304 92 aaKnown RBP12.97□□□□□ -0.33
PHGDH-232ENST00000641947 BEAN1Q3B7T3 259 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 KIAA1644Q3SXP7 199 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 MUC4Q99102 2169 aa12.97□□□□□ -0.33
PHGDH-232ENST00000641947 CRXO43186 299 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-232ENST00000641947 HLA-DQA1P01909 254 aa12.96□□□□□ -0.34
PHGDH-232ENST00000641947 MT-ND6P03923 174 aa12.96□□□□□ -0.34
PHGDH-232ENST00000641947 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.34
PHGDH-232ENST00000641947 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.34
PHGDH-232ENST00000641947 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.34
PHGDH-232ENST00000641947 COX19Q49B96 90 aa12.96□□□□□ -0.34
PHGDH-232ENST00000641947 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.34
PHGDH-232ENST00000641947 ANK2Q01484 3957 aa12.96□□□□□ -0.34
PHGDH-232ENST00000641947 C5orf52A6NGY3 159 aa12.95□□□□□ -0.34
PHGDH-232ENST00000641947 OR11H12B2RN74 326 aa12.95□□□□□ -0.34
PHGDH-232ENST00000641947 NDUFA6P56556 154 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 CNFNQ9BYD5 112 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 GNRH2O43555 120 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 SPRY2O43597 315 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 RIGQ13278 110 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
PHGDH-232ENST00000641947 PKD1L1Q8TDX9 2849 aa12.93□□□□□ -0.34
PHGDH-232ENST00000641947 H3BVH4 76 aa12.93□□□□□ -0.34
PHGDH-232ENST00000641947 APCSP02743 223 aa12.93□□□□□ -0.34
PHGDH-232ENST00000641947 S100A6P06703 90 aa12.93□□□□□ -0.34
PHGDH-232ENST00000641947 TSPOP30536 169 aa12.93□□□□□ -0.34
PHGDH-232ENST00000641947 OR10AG1Q8NH19 301 aa12.93□□□□□ -0.34
PHGDH-232ENST00000641947 SNAI2O43623 268 aa12.92□□□□□ -0.34
PHGDH-232ENST00000641947 ZNF747Q9BV97 191 aa12.92□□□□□ -0.34
PHGDH-232ENST00000641947 TP53TG3Q9ULZ0 132 aa12.92□□□□□ -0.34
PHGDH-232ENST00000641947 NTF3P20783 257 aa12.92□□□□□ -0.34
PHGDH-232ENST00000641947 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
PHGDH-232ENST00000641947 COL6A5A8TX70 2615 aa12.91□□□□□ -0.34
PHGDH-232ENST00000641947 RNASE3P12724 160 aaKnown RBP12.91□□□□□ -0.34
PHGDH-232ENST00000641947 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
PHGDH-232ENST00000641947 F2Z2F3 143 aa12.9□□□□□ -0.34
PHGDH-232ENST00000641947 OR5AL1P0C617 328 aa12.9□□□□□ -0.34
PHGDH-232ENST00000641947 TWIST1Q15672 202 aa12.9□□□□□ -0.34
PHGDH-232ENST00000641947 TDRG1Q3Y452 100 aa12.9□□□□□ -0.34
PHGDH-232ENST00000641947 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.34
PHGDH-232ENST00000641947 CLUHP3Q96NS8 147 aa12.9□□□□□ -0.34
PHGDH-232ENST00000641947 A0A1B0GW15 77 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 UBE2CO00762 179 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 SRIP30626 198 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 C9orf66Q5T8R8 295 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 FAM110AQ9BQ89 295 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 SCRT2Q9NQ03 307 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-232ENST00000641947 ASIPP42127 132 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 STHQ8IWL8 128 aa12.89□□□□□ -0.35
PHGDH-232ENST00000641947 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
PHGDH-232ENST00000641947 IFITM10A6NMD0 228 aa12.88□□□□□ -0.35
PHGDH-232ENST00000641947 HOXA5P20719 270 aa12.88□□□□□ -0.35
PHGDH-232ENST00000641947 INSL3P51460 131 aa12.88□□□□□ -0.35
PHGDH-232ENST00000641947 LINC00310P59036 64 aa12.88□□□□□ -0.35
PHGDH-232ENST00000641947 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
PHGDH-232ENST00000641947 WFDC9Q8NEX5 89 aa12.88□□□□□ -0.35
PHGDH-232ENST00000641947 IGHV1OR15-1A0A075B7D0 117 aa12.87□□□□□ -0.35
PHGDH-232ENST00000641947 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-232ENST00000641947 PRM2P04554 102 aa12.87□□□□□ -0.35
PHGDH-232ENST00000641947 Q8N1Y9 231 aa12.87□□□□□ -0.35
PHGDH-232ENST00000641947 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-232ENST00000641947 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 S100A8P05109 93 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 IGLL1P15814 213 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 AMN1Q8IY45 258 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms