RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 LRP4O75096 1905 aa12.14□□□□□ -0.47
UBE3A-227ENST00000638011 STPG1Q5TH74 334 aa12.14□□□□□ -0.47
UBE3A-227ENST00000638011 TMEM219Q86XT9 240 aa12.14□□□□□ -0.47
UBE3A-227ENST00000638011 PAX9P55771 341 aa12.14□□□□□ -0.47
UBE3A-227ENST00000638011 IGHV1OR15-1A0A075B7D0 117 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 CRYGCP07315 174 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 RHPN1-AS1Q9BWJ2 59 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 LTAP01374 205 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 RFPL3SP0C7P2 107 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
UBE3A-227ENST00000638011 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 APOC4P55056 127 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 MRPL53Q96EL3 112 aaKnown RBP12.12□□□□□ -0.47
UBE3A-227ENST00000638011 UBE2AP49459 152 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 DAD1P61803 113 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
UBE3A-227ENST00000638011 LGALS9O00182 355 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 SPTSSBQ8NFR3 76 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 LINC00473A8K010 186 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 TMEM213A2RRL7 107 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 CYYR1Q96J86 154 aa12.12□□□□□ -0.47
UBE3A-227ENST00000638011 PIFOQ8TCI5 191 aa12.11□□□□□ -0.47
UBE3A-227ENST00000638011 WFDC12Q8WWY7 111 aa12.11□□□□□ -0.47
UBE3A-227ENST00000638011 A0A1B0GUS0 222 aa12.11□□□□□ -0.47
UBE3A-227ENST00000638011 K7EM74 188 aa12.11□□□□□ -0.47
UBE3A-227ENST00000638011 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
UBE3A-227ENST00000638011 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
UBE3A-227ENST00000638011 DYNAPQ8N1N2 210 aa12.11□□□□□ -0.47
UBE3A-227ENST00000638011 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
UBE3A-227ENST00000638011 IGHV3OR16-10A0A075B7F0 116 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 C3orf36Q3SXR2 165 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 Q6P435 159 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 DKK2Q9UBU2 259 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 LINC00479Q96M42 142 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 Q9H8V8 135 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 IGKV1-27A0A075B6S5 117 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
UBE3A-227ENST00000638011 C22orf46C9J442 243 aa12.09□□□□□ -0.47
UBE3A-227ENST00000638011 ZFP36L1Q07352 338 aaKnown RBP12.09□□□□□ -0.47
UBE3A-227ENST00000638011 C3orf22Q8N5N4 141 aa12.09□□□□□ -0.47
UBE3A-227ENST00000638011 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
UBE3A-227ENST00000638011 IGKV1-12A0A0C4DH73 117 aa12.09□□□□□ -0.47
UBE3A-227ENST00000638011 IGKV1D-12P01611 117 aa12.09□□□□□ -0.47
UBE3A-227ENST00000638011 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
UBE3A-227ENST00000638011 CPAMD8Q8IZJ3 1885 aa12.09□□□□□ -0.47
UBE3A-227ENST00000638011 MRPS36P82909 103 aaKnown RBP12.08□□□□□ -0.48
UBE3A-227ENST00000638011 NDUFA4O00483 81 aa12.08□□□□□ -0.48
UBE3A-227ENST00000638011 E9PLN8 166 aa12.08□□□□□ -0.48
UBE3A-227ENST00000638011 FAM27E3Q08E93 113 aa12.08□□□□□ -0.48
UBE3A-227ENST00000638011 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
UBE3A-227ENST00000638011 C8orf49Q96NF6 230 aa12.08□□□□□ -0.48
UBE3A-227ENST00000638011 NDPQ00604 133 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 ZC2HC1AQ96GY0 325 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 SND1-IT1Q9HBX3 110 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 MSRB2Q9Y3D2 182 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 B4DSR2 109 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 FAM201AQ5SY85 155 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 IGLV3-19P01714 112 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 IGHV1-18A0A0C4DH31 117 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 LINC01560Q8TB33 94 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 PTH2Q96A98 100 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 DKK1O94907 266 aa12.07□□□□□ -0.48
UBE3A-227ENST00000638011 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-227ENST00000638011 H3BRN7 92 aa12.06□□□□□ -0.48
UBE3A-227ENST00000638011 PSPNO60542 156 aa12.06□□□□□ -0.48
UBE3A-227ENST00000638011 FGFBP3Q8TAT2 258 aa12.06□□□□□ -0.48
UBE3A-227ENST00000638011 C5orf63A6NC05 138 aa12.06□□□□□ -0.48
UBE3A-227ENST00000638011 ETDCA0A1B0GVM5 59 aa12.06□□□□□ -0.48
UBE3A-227ENST00000638011 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
UBE3A-227ENST00000638011 FLG2Q5D862 2391 aaPredicted RBP12.06□□□□□ -0.48
UBE3A-227ENST00000638011 SETD2Q9BYW2 2564 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-227ENST00000638011 NDUFA7O95182 113 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 FAM110DQ8TAY7 271 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-227ENST00000638011 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-227ENST00000638011 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 ETV2O00321 342 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-227ENST00000638011 LYPD3O95274 346 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 IGKV1-16P04430 117 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 LMO1P25800 156 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 EFNA4P52798 201 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 FXYD5Q96DB9 178 aa12.05□□□□□ -0.48
UBE3A-227ENST00000638011 IGKV3D-7A0A0C4DH55 119 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 SPAARA0A1B0GVQ0 90 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 BUB3O43684 328 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 ZNF833PQ6ZTB9 187 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms