RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 KCNS1Q96KK3 526 aa10.12□□□□□ -0.79
CACNA1A-249ENST00000637777 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
CACNA1A-249ENST00000637777 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 HOXA5P20719 270 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 CCL18P55774 89 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 LGALS9BQ3B8N2 356 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 DPPA3Q6W0C5 159 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 HIST1H2BAQ96A08 127 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 LINC00479Q96M42 142 aa10.11□□□□□ -0.79
CACNA1A-249ENST00000637777 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 GNRH2O43555 120 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 PAGE4O60829 102 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 TYMSP04818 313 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 AKR1C3P42330 323 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 SPXQ9BT56 116 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 ARL2-SNX15V9GYD0 113 aa10.1□□□□□ -0.79
CACNA1A-249ENST00000637777 MUC4Q99102 2169 aa10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 TEX46H3BTG2 121 aa10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 IGLV2-11P01706 119 aa10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 C1QBP02746 253 aa10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 PFN1P07737 140 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 RNF212Q495C1 297 aa10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 Q86TA4 180 aa10.09□□□□□ -0.79
CACNA1A-249ENST00000637777 VPS13DQ5THJ4 4388 aa10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 PAX4O43316 350 aa10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 ZNF80P51504 273 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 TDRG1Q3Y452 100 aa10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 LGALSLQ3ZCW2 172 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 FMC1Q96HJ9 113 aa10.08□□□□□ -0.8
CACNA1A-249ENST00000637777 C9JCJ5 164 aa10.07□□□□□ -0.8
CACNA1A-249ENST00000637777 M0R2P5 195 aa10.07□□□□□ -0.8
CACNA1A-249ENST00000637777 SFTA3P0C7M3 94 aa10.07□□□□□ -0.8
CACNA1A-249ENST00000637777 S100A4P26447 101 aaKnown RBP10.07□□□□□ -0.8
CACNA1A-249ENST00000637777 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
CACNA1A-249ENST00000637777 TCEAL7Q9BRU2 100 aa10.07□□□□□ -0.8
CACNA1A-249ENST00000637777 ORM1P02763 201 aa10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 RAB5CP51148 216 aa10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 SLC51BQ86UW2 128 aa10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 OR4C5Q8NGB2 326 aa10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 PCNPQ8WW12 178 aaKnown RBP10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
CACNA1A-249ENST00000637777 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 FAM3BP58499 235 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 SLAQ13239 276 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 ZFP30Q9Y2G7 519 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 ICOSQ9Y6W8 199 aa10.05□□□□□ -0.8
CACNA1A-249ENST00000637777 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 SCO2A0A1W2PP80 73 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 B4DEV8 164 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 H3BNG1 76 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 M0R036 132 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 NHLRC2Q8NBF2 726 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 RASL10AQ92737 203 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 ZC2HC1AQ96GY0 325 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 MANBALQ9NQG1 85 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
CACNA1A-249ENST00000637777 A0A096LPF7 62 aa10.03□□□□□ -0.8
CACNA1A-249ENST00000637777 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
CACNA1A-249ENST00000637777 SH2D1AO60880 128 aa10.03□□□□□ -0.8
CACNA1A-249ENST00000637777 ASIPP42127 132 aa10.03□□□□□ -0.8
CACNA1A-249ENST00000637777 SULT1A2P50226 295 aa10.03□□□□□ -0.8
CACNA1A-249ENST00000637777 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
CACNA1A-249ENST00000637777 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.81
CACNA1A-249ENST00000637777 IFNA1P01562 189 aa10.02□□□□□ -0.81
CACNA1A-249ENST00000637777 S100A9P06702 114 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-249ENST00000637777 CRYBA4P53673 196 aa10.02□□□□□ -0.81
CACNA1A-249ENST00000637777 FHL2Q14192 279 aa10.02□□□□□ -0.81
CACNA1A-249ENST00000637777 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
CACNA1A-249ENST00000637777 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 H3BVH4 76 aa10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 LTAP01374 205 aa10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 GYPEP15421 78 aa10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 SRIP30626 198 aa10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 C9orf62Q8N4C0 152 aa10.01□□□□□ -0.81
CACNA1A-249ENST00000637777 GRIFINA4D1Z8 144 aa10□□□□□ -0.81
CACNA1A-249ENST00000637777 CCL20P78556 96 aa10□□□□□ -0.81
CACNA1A-249ENST00000637777 ESRGQ1W209 222 aa10□□□□□ -0.81
CACNA1A-249ENST00000637777 PRR27Q6MZM9 219 aa10□□□□□ -0.81
CACNA1A-249ENST00000637777 BAGE2Q86Y30 109 aa10□□□□□ -0.81
CACNA1A-249ENST00000637777 EPPK1P58107 5090 aaKnown RBP9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 IGKV3D-20A0A0C4DH25 116 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 RNASE3P12724 160 aaKnown RBP9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 C1orf134Q5TEV5 83 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 SYT8Q8NBV8 401 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 ZNRF2Q8NHG8 242 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
CACNA1A-249ENST00000637777 Q9H8V8 135 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms