RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 PLXNB3Q9ULL4 1909 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 DOCK7Q96N67 2140 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 LOC107984156A0A0G2JMH3 177 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 A0A1B0GVX0 72 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 TCRBV4S1A1TA0A5B7 111 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 C19orf71A6NCJ1 209 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 CRYM-AS1A6NIL9 109 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 BPY2O14599 106 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 LECT2O14960 151 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 SH2D1AO60880 128 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 IGKV1D-33P01593 117 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 IGKV1-33P01594 117 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 IGLV1-51P01701 117 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 APCSP02743 223 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 TRGV3P03979 118 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 HSPB1P04792 205 aaKnown RBP2.05□□□□□ -2.08
VIM-210ENST00000637053 C3orf79P0CE67 100 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 IGHV1-8P0DP01 117 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 COX8AP10176 69 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 LINC01547P58512 204 aaPredicted RBP2.05□□□□□ -2.08
VIM-210ENST00000637053 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 LYPD5Q6UWN5 251 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 LINC00643Q86TS7 51 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 ARL17AQ8IVW1 177 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 C20orf203Q8NBC4 194 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 SMCR5Q8TEV8 140 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 TMEM141Q96I45 108 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 Q96M85 177 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 FGFBP2Q9BYJ0 223 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 MANBALQ9NQG1 85 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 NDUFA12Q9UI09 145 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 NKTRP30414 1462 aaKnown RBP2.05□□□□□ -2.08
VIM-210ENST00000637053 ABCC6O95255 1503 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 KCPQ6ZWJ8 1503 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 SHANK3Q9BYB0 1731 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 RGPD3A6NKT7 1758 aaPredicted RBP2.05□□□□□ -2.08
VIM-210ENST00000637053 KIDINS220Q9ULH0 1771 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 TSPOAP1O95153 1857 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 SCN9AQ15858 1988 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 MYO9BQ13459 2157 aa2.05□□□□□ -2.08
VIM-210ENST00000637053 TRAV13-2A0A0B4J235 113 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 hDV103S1A0JD37 113 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 TMEM223A0PJW6 202 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 PMS2P5A8MQ11 134 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 B4DSR2 109 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 C11orf94C9JXX5 98 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 BCE1O60756 84 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 LY6HO94772 140 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 SCN4AP35499 1836 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 DSCR4P56555 118 aaPredicted RBP2.04□□□□□ -2.08
VIM-210ENST00000637053 SYCNQ0VAF6 134 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 SHROOM2Q13796 1616 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 DOCK1Q14185 1865 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 ZNF56Q15929 161 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 ESRGQ1W209 222 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 TMEM170BQ5T4T1 132 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 AHDC1Q5TGY3 1603 aaPredicted RBP2.04□□□□□ -2.08
VIM-210ENST00000637053 CYP2G1PQ6ZSU1 146 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 MICAL3Q7RTP6 2002 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 RALGAPBQ86X10 1494 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 HEATR5AQ86XA9 2040 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 ASXL1Q8IXJ9 1541 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 Q8IYB0 196 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 FAM19A2Q8N3H0 131 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 RPRMLQ8N4K4 120 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 Q8N814 137 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 Q8NDZ9 215 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 LINC01006Q8NI28 216 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 CIRBP-AS1Q8TBR5 109 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 DYNLRB2Q8TF09 96 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 TMEM190Q8WZ59 177 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 LINC00467Q9BRT7 94 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 RPP21Q9H633 154 aaKnown RBP2.04□□□□□ -2.08
VIM-210ENST00000637053 PCNX3Q9H6A9 2034 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 NWD2Q9ULI1 1742 aa2.04□□□□□ -2.08
VIM-210ENST00000637053 GON4LQ3T8J9 2241 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 TANC2Q9HCD6 1990 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 PATJQ8NI35 1801 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 KDM3BQ7LBC6 1761 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 BIVM-ERCC5R4GMW8 1640 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 UGGT1Q9NYU2 1555 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 IGKV2D-26A0A0A0MRZ7 120 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 TRAV3A0A0B4J244 114 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 A0A0D9SFI3 127 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 H7BZZ5 65 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 CPSF4O95639 269 aaKnown RBP2.03□□□□□ -2.08
VIM-210ENST00000637053 IGHV1-46P01743 117 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 MSMBP08118 114 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 PATE4P0C8F1 98 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 TLX1NBP0CAT3 122 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 CFC1BP0CG36 223 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 RPL28P46779 137 aaKnown RBP2.03□□□□□ -2.08
VIM-210ENST00000637053 XCL1P47992 114 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 SMIM11AP58511 58 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 PSMG4Q5JS54 123 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 SLC48A1Q6P1K1 146 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 CYB561D1Q8N8Q1 229 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 C15orf56Q8N910 161 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 SMIM7Q9BQ49 75 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 SMAD5-AS1Q9Y6J3 95 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms