RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 LEPROTO15243 131 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 COL11A2P13942 1736 aaPredicted RBP2.46□□□□□ -2.02
LPP-221ENST00000618621 LAMA2P24043 3122 aaKnown RBP2.46□□□□□ -2.02
LPP-221ENST00000618621 TMEM89A2RUT3 159 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 IGLV1-44P01699 117 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 PRSS33Q8NF86 280 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 MPLKIPQ8TAP9 179 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 IGKV2-40A0A087WW87 121 aaPredicted RBP2.46□□□□□ -2.02
LPP-221ENST00000618621 IGKV2D-40P01614 121 aaPredicted RBP2.46□□□□□ -2.02
LPP-221ENST00000618621 FRMD6-AS1P0C7T7 363 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 CRYBA4P53673 196 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 LINC01545Q5VT33 79 aa2.46□□□□□ -2.02
LPP-221ENST00000618621 TSSC4Q9Y5U2 329 aaPredicted RBP2.46□□□□□ -2.02
LPP-221ENST00000618621 COL5A3P25940 1745 aaPredicted RBP2.45□□□□□ -2.02
LPP-221ENST00000618621 LTAP01374 205 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 IGKV1-16P04430 117 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 C12orf74Q32Q52 190 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TRGV2A0A075B6R0 118 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 IGHV3OR16-12A0A075B7B8 117 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 C1orf159Q96HA4 380 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 U3KQE9 123 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 GATA3P23771 443 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TMEM86BQ8N661 226 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 MCRIP2Q9BUT9 160 aaKnown RBP2.45□□□□□ -2.02
LPP-221ENST00000618621 TNRC6AQ8NDV7 1962 aaKnown RBP2.45□□□□□ -2.02
LPP-221ENST00000618621 TRAV25A0A0B4J276 109 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 EFNA4P52798 201 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 PRB3Q04118 309 aaPredicted RBP2.45□□□□□ -2.02
LPP-221ENST00000618621 PPDPFLQ8WWR9 84 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 PRSS22Q9GZN4 317 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 C17orf58Q2M2W7 97 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 EML5Q05BV3 1969 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 A0A0G2JNJ9 132 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 Q9UFV3 132 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TRAV13-2A0A0B4J235 113 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 E7EQL1 145 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 PRYO14603 147 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TFF1P04155 84 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 SDIM1Q6ZPB5 146 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 NPBQ8NG41 125 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 GAGE12HA6NDE8 117 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TRACP01848 142 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 LGALS9BQ3B8N2 356 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 LGALS9CQ6DKI2 356 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 NRXN2Q9P2S2 1712 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TRAV12-3A0A0B4J271 114 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 H3BQ85 93 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 RBM3P98179 157 aaKnown RBP2.45□□□□□ -2.02
LPP-221ENST00000618621 FXYD5Q96DB9 178 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 Q6ZSR3 168 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 C11orf53Q8IXP5 236 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 NAA38Q9BRA0 125 aaKnown RBP2.45□□□□□ -2.02
LPP-221ENST00000618621 SBF2Q86WG5 1849 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 SRD5A1P18405 259 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 CHAC1Q9BUX1 264 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 TMEM126AQ9H061 195 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 PLXNB2O15031 1838 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 RCHY1Q96PM5 261 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 CRLF1O75462 422 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 VMO1Q7Z5L0 202 aa2.45□□□□□ -2.02
LPP-221ENST00000618621 A8MZ25 164 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 ZNF831Q5JPB2 1677 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 IGKV2-28A0A075B6P5 120 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 IGKV2D-28P01615 120 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 IGLL1P15814 213 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 STHQ8IWL8 128 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 JPT2Q9H910 190 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 TRPM7Q96QT4 1865 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 INS-IGF2F8WCM5 200 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 INSP01308 110 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 IGHG4P01861 327 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 COL8A2P25067 703 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 C10orf55Q5SWW7 151 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 ZNF747Q9BV97 191 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 HECTD1Q9ULT8 2610 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 RBAKDNA6NC62 111 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 MBD3L4A6NDZ8 208 aaPredicted RBP2.44□□□□□ -2.02
LPP-221ENST00000618621 MBD3L3A6NE82 208 aaPredicted RBP2.44□□□□□ -2.02
LPP-221ENST00000618621 MBD3L5A6NJ08 208 aaPredicted RBP2.44□□□□□ -2.02
LPP-221ENST00000618621 MBD3L2Q8NHZ7 208 aaPredicted RBP2.44□□□□□ -2.02
LPP-221ENST00000618621 TRBV6-1A0A0K0K1D8 114 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 PRSS29PA6NIE9 313 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 PRR20EP86478 221 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 PRR20CP86479 221 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 PRR20DP86480 221 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 PRR20BP86481 221 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 PRR20AP86496 221 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 ZNF672Q499Z4 452 aaPredicted RBP2.44□□□□□ -2.02
LPP-221ENST00000618621 DEFB125Q8N687 156 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 HLA-DRB4X5D2U9 266 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 HLA-DMBP28068 263 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 RASL10AQ92737 203 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 TRPT1Q86TN4 253 aaKnown RBP2.44□□□□□ -2.02
LPP-221ENST00000618621 LY6G6EA0A0G2JKS1 128 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 ZNF561-AS1K7EIQ3 104 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 CD24P25063 80 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 U3KQA8 63 aa2.44□□□□□ -2.02
LPP-221ENST00000618621 FNDC1Q4ZHG4 1894 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 424 ms