RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 C8orf49Q96NF6 230 aa12.72□□□□□ -0.37
CNOT3-208ENST00000613073 A0A1B0GWB2 263 aa12.72□□□□□ -0.37
CNOT3-208ENST00000613073 CKS2P33552 79 aa12.72□□□□□ -0.37
CNOT3-208ENST00000613073 C5orf56Q8N8D9 126 aa12.72□□□□□ -0.37
CNOT3-208ENST00000613073 FAM110DQ8TAY7 271 aaPredicted RBP12.72□□□□□ -0.37
CNOT3-208ENST00000613073 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
CNOT3-208ENST00000613073 M0R3E3 92 aa12.71□□□□□ -0.37
CNOT3-208ENST00000613073 GATA3P23771 443 aa12.71□□□□□ -0.37
CNOT3-208ENST00000613073 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
CNOT3-208ENST00000613073 UBR5O95071 2799 aaPredicted RBP12.71□□□□□ -0.37
CNOT3-208ENST00000613073 ABCA12Q86UK0 2595 aa12.71□□□□□ -0.37
CNOT3-208ENST00000613073 E9PLD3 99 aa12.71□□□□□ -0.38
CNOT3-208ENST00000613073 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.38
CNOT3-208ENST00000613073 CLEC3BP05452 202 aa12.71□□□□□ -0.38
CNOT3-208ENST00000613073 LY6EQ16553 131 aa12.71□□□□□ -0.38
CNOT3-208ENST00000613073 GAGE13Q4V321 117 aa12.71□□□□□ -0.38
CNOT3-208ENST00000613073 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.38
CNOT3-208ENST00000613073 ZNF48Q96MX3 618 aaPredicted RBP12.71□□□□□ -0.38
CNOT3-208ENST00000613073 PTPN13Q12923 2485 aa12.71□□□□□ -0.38
CNOT3-208ENST00000613073 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
CNOT3-208ENST00000613073 SIGLEC15Q6ZMC9 328 aa12.7□□□□□ -0.38
CNOT3-208ENST00000613073 CEND1Q8N111 149 aa12.7□□□□□ -0.38
CNOT3-208ENST00000613073 PIFOQ8TCI5 191 aa12.7□□□□□ -0.38
CNOT3-208ENST00000613073 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
CNOT3-208ENST00000613073 SYT8Q8NBV8 401 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 PSG8Q9UQ74 426 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 FOXC2Q99958 501 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 EVI2AP22794 236 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 TCTEX1D4Q5JR98 221 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 TMEM160Q9NX00 188 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
CNOT3-208ENST00000613073 MSMBP08118 114 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 LEPP41159 167 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 ZNF502Q8TBZ5 544 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 APOMO95445 188 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 MT-ATP8P03928 68 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 ODF1Q14990 250 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 TWIST1Q15672 202 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 MAPKAPK5-AS1Q8N8E1 139 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 MOB4Q9Y3A3 225 aa12.68□□□□□ -0.38
CNOT3-208ENST00000613073 SPINK8P0C7L1 97 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 IGHV3OR16-13A0A075B7E8 117 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 IGHV3-74A0A0B4J1X5 117 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 ZNF843Q8N446 348 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 SS18L2Q9UHA2 77 aa12.67□□□□□ -0.38
CNOT3-208ENST00000613073 SCGB2A1O75556 95 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 AVPP01185 164 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 CT45A10P0DMU9 189 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 MAPK1IP1LQ8NDC0 245 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 CCDC140Q96MF4 163 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
CNOT3-208ENST00000613073 H3BUX3 64 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 IGKCP01834 107 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 SRSF1Q07955 248 aaKnown RBP eCLIP12.66□□□□□ -0.38
CNOT3-208ENST00000613073 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
CNOT3-208ENST00000613073 C8orf86Q6ZUL3 223 aa12.65□□□□□ -0.38
CNOT3-208ENST00000613073 AAMDCQ9H7C9 122 aa12.65□□□□□ -0.38
CNOT3-208ENST00000613073 MSRB1Q9NZV6 116 aa12.65□□□□□ -0.38
CNOT3-208ENST00000613073 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
CNOT3-208ENST00000613073 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
CNOT3-208ENST00000613073 TM2D2Q9BX73 214 aa12.65□□□□□ -0.38
CNOT3-208ENST00000613073 IGHV3-49A0A0A0MS15 119 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 TRAV41A0A0B4J266 112 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-208ENST00000613073 LYPD1Q8N2G4 141 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 PRO0461Q9UI25 63 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 SMAD5-AS1Q9Y6J3 95 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 A0A1B0GW15 77 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 RPL7P18124 248 aaKnown RBP12.64□□□□□ -0.39
CNOT3-208ENST00000613073 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 RNF183Q96D59 192 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 U3KQK5 164 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
CNOT3-208ENST00000613073 COX6B1P14854 86 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 FHL3Q13643 280 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 TMEM75Q8N9X5 138 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 PTH2Q96A98 100 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 IGKV2-40A0A087WW87 121 aaPredicted RBP12.63□□□□□ -0.39
CNOT3-208ENST00000613073 B4DSR2 109 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 SH2D1AO60880 128 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 IGKV2D-40P01614 121 aaPredicted RBP12.63□□□□□ -0.39
CNOT3-208ENST00000613073 EEF1AKMT3Q96AZ1 226 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 CDIP1Q9H305 208 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 ZFAND3Q9H8U3 227 aa12.63□□□□□ -0.39
CNOT3-208ENST00000613073 NAV2Q8IVL1 2488 aa12.62□□□□□ -0.39
CNOT3-208ENST00000613073 PDE6HQ13956 83 aa12.62□□□□□ -0.39
CNOT3-208ENST00000613073 BLCAPP62952 87 aa12.62□□□□□ -0.39
CNOT3-208ENST00000613073 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
CNOT3-208ENST00000613073 Q6ZS46 218 aa12.62□□□□□ -0.39
CNOT3-208ENST00000613073 TMEM158Q8WZ71 300 aa12.62□□□□□ -0.39
CNOT3-208ENST00000613073 MRPL35Q9NZE8 188 aaKnown RBP12.62□□□□□ -0.39
CNOT3-208ENST00000613073 NBPF19A0A087WUL8 3843 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 XGP55808 180 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 FOXI1Q12951 378 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms