RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 HSBP1L1C9JCN9 74 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 NUDT3O95989 172 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 DKK2Q9UBU2 259 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 SLC25A34Q6PIV7 304 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
PCDHGA3-202ENST00000612467 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 HBDP02042 147 aa10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 NPFFR1Q9GZQ6 430 aa10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 LEPP41159 167 aa10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA3-202ENST00000612467 M0R381 172 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 NDUFS8O00217 210 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 NDUFA4O00483 81 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 SOCS3O14543 225 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 KRTAP10-9P60411 292 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 SPANXN1Q5VSR9 72 aa10.66□□□□□ -0.7
PCDHGA3-202ENST00000612467 RNASE4P34096 147 aaKnown RBP10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 CDKN1BP46527 198 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 IFI27L1Q96BM0 104 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 UBR5O95071 2799 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 B4DSR2 109 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 GNRH2O43555 120 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 DUX5Q96PT3 197 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 TTTY13Q9BZ97 58 aa10.65□□□□□ -0.7
PCDHGA3-202ENST00000612467 TGFAP01135 160 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 SRSF2Q01130 221 aaKnown RBP10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 UBE2V1Q13404 147 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 C2orf91Q6ZV80 131 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 TMEM158Q8WZ71 300 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 CBY3A6NI87 242 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 IGKV3-20P01619 116 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 IGLV1-40P01703 118 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 SRSF1Q07955 248 aaKnown RBP eCLIP10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 ORAOV1Q8WV07 137 aa10.64□□□□□ -0.71
PCDHGA3-202ENST00000612467 MUC4Q99102 2169 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 SETD2Q9BYW2 2564 aaPredicted RBP10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 NF1P21359 2839 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 RNF223E7ERA6 249 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
PCDHGA3-202ENST00000612467 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 CFHR3Q02985 330 aa10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 NRACQ8N912 160 aa10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 COX11Q9Y6N1 276 aa10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 K7EP13 123 aa10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 C14orf178Q8N769 122 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA3-202ENST00000612467 COX8AP10176 69 aa10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 NMUP48645 174 aa10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 RPL39LQ96EH5 51 aaKnown RBP10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 APCP25054 2843 aa10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 FGF6P10767 208 aa10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
PCDHGA3-202ENST00000612467 SVIPQ8NHG7 77 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 JPT2Q9H910 190 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 PEF1Q9UBV8 284 aaKnown RBP10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 A0A096LNT2 108 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 IGKV2D-26A0A0A0MRZ7 120 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 CD5LO43866 347 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 PRSS1P07477 247 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 LGALS9BQ3B8N2 356 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
PCDHGA3-202ENST00000612467 PPBPP02775 128 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 ZNF688P0C7X2 276 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 OR4C5Q8NGB2 326 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 FOXC2Q99958 501 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 BEX4Q9NWD9 120 aaPredicted RBP10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 PRRC2AP48634 2157 aaKnown RBP10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 MGPP08493 103 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 FCER1GP30273 86 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 LINC00477Q96M19 166 aa10.59□□□□□ -0.71
PCDHGA3-202ENST00000612467 TRAV12-2A0A075B6T6 113 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 C7orf71A4D174 169 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 TAX1BP3O14907 124 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 PSMB8P28062 276 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 C18orf65Q6ZTR6 163 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 AKAP9Q99996 3911 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 CR1P17927 2039 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 OVOL1O14753 267 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 NAA38Q9BRA0 125 aaKnown RBP10.58□□□□□ -0.72
PCDHGA3-202ENST00000612467 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms