RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 NPSP0C0P6 89 aa11.49□□□□□ -0.57
VRK3-218ENST00000600031 TFPI2P48307 235 aa11.49□□□□□ -0.57
VRK3-218ENST00000600031 STPG4Q8N801 248 aa11.49□□□□□ -0.57
VRK3-218ENST00000600031 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
VRK3-218ENST00000600031 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
VRK3-218ENST00000600031 SYS1-DBNDD2H3BUS1 97 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 PSG9Q00887 426 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 PSG3Q16557 428 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 Q6AWC8 147 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 RAX2Q96IS3 184 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 AAMDCQ9H7C9 122 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 OR4C46A6NHA9 309 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 KRTAP10-3P60369 221 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 ZC2HC1AQ96GY0 325 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 ST20Q9HBF5 79 aa11.48□□□□□ -0.57
VRK3-218ENST00000600031 TEP1Q99973 2627 aaKnown RBP11.47□□□□□ -0.57
VRK3-218ENST00000600031 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 JMJD1CQ15652 2540 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 SERTM2A0A1B0GWG4 89 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 M0QZ24 198 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 DLX4Q92988 240 aaPredicted RBP11.47□□□□□ -0.57
VRK3-218ENST00000600031 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
VRK3-218ENST00000600031 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.57
VRK3-218ENST00000600031 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
VRK3-218ENST00000600031 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 RPL11P62913 178 aaKnown RBP11.45□□□□□ -0.58
VRK3-218ENST00000600031 PRR31Q5SQ13 230 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 ADAMTSL5Q6ZMM2 481 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 RNF182Q8N6D2 247 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.45□□□□□ -0.58
VRK3-218ENST00000600031 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 ADARB2-AS1A8MUL3 147 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 CCL24O00175 119 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 HINT1P49773 126 aaPredicted RBP11.45□□□□□ -0.58
VRK3-218ENST00000600031 FHL3Q13643 280 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
VRK3-218ENST00000600031 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 OR9G4Q8NGQ1 327 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 CSN1S1P47710 185 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 LINC00173Q6ZV60 143 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 PPP1R14DQ9NXH3 145 aa11.44□□□□□ -0.58
VRK3-218ENST00000600031 FBLL1A6NHQ2 334 aaKnown RBP11.43□□□□□ -0.58
VRK3-218ENST00000600031 SOCS3O14543 225 aa11.43□□□□□ -0.58
VRK3-218ENST00000600031 BMI1P35226 326 aa11.43□□□□□ -0.58
VRK3-218ENST00000600031 CRIP1P50238 77 aa11.43□□□□□ -0.58
VRK3-218ENST00000600031 WNK1Q9H4A3 2382 aa11.43□□□□□ -0.58
VRK3-218ENST00000600031 IGKV2-40A0A087WW87 121 aaPredicted RBP11.42□□□□□ -0.58
VRK3-218ENST00000600031 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 IGKV2D-40P01614 121 aaPredicted RBP11.42□□□□□ -0.58
VRK3-218ENST00000600031 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 ZNF493Q6ZR52 646 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 MS4A6AQ9H2W1 248 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 C20orf173Q96LM9 149 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 AP5S1Q9NUS5 200 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
VRK3-218ENST00000600031 CSN3P07498 182 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 COX8CQ7Z4L0 72 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 ASCL2Q99929 193 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 ZNF138P52744 262 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 SAPCD1Q5SSQ6 148 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 SLC25A34Q6PIV7 304 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 FA2HQ7L5A8 372 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
VRK3-218ENST00000600031 MAST4O15021 2626 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 TMEM189A5PLL7 270 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 DCANP1Q8TF63 244 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 VGLL1Q99990 258 aa11.4□□□□□ -0.58
VRK3-218ENST00000600031 hDV102S1A0JD36 115 aa11.39□□□□□ -0.59
VRK3-218ENST00000600031 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
VRK3-218ENST00000600031 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
VRK3-218ENST00000600031 MRPL53Q96EL3 112 aaKnown RBP11.39□□□□□ -0.59
VRK3-218ENST00000600031 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
VRK3-218ENST00000600031 SCRT2Q9NQ03 307 aa11.39□□□□□ -0.59
VRK3-218ENST00000600031 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
VRK3-218ENST00000600031 ERCC8Q13216 396 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 ZNF747Q9BV97 191 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 U3KQK5 164 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 OVOL1O14753 267 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 SH2D1AO60880 128 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 TPPP3Q9BW30 176 aa11.38□□□□□ -0.59
VRK3-218ENST00000600031 PTTG1IPP53801 180 aa11.37□□□□□ -0.59
VRK3-218ENST00000600031 DEFB1P60022 68 aa11.37□□□□□ -0.59
VRK3-218ENST00000600031 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
VRK3-218ENST00000600031 TENM1Q9UKZ4 2725 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 UBE2V1Q13404 147 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 C12orf54Q6X4T0 127 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 Q8TAT8 98 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 PRR25Q96S07 402 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms