RNA–Protein interactions for RNA: ENST00000599872.1

SMIM7-218, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-218	ENST00000599872	HOXB5	P09067	269 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	MGST1	P10620	155 aa	Known RBP	4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	INPP1	P49441	399 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	RRAS2	P62070	204 aa	Predicted RBP	4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	ZNF876P	Q49A33	203 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	C4orf46	Q504U0	113 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	KCNIP4	Q6PIL6	250 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	CLPSL2	Q6UWE3	100 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	CLRN3	Q8NCR9	226 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	OR2T35	Q8NGX2	323 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	SOST	Q9BQB4	213 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	C14orf166	Q9Y224	244 aa	Known RBP	4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	RNF24	Q9Y225	148 aa		4.24	□□□□□ -1.73
SMIM7-218	ENST00000599872	TRBV19	A0A075B6N1	114 aa		4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	ANG	P03950	147 aa	Known RBP	4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	TYMS	P04818	313 aa		4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	SMIM18	P0DKX4	95 aa		4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	HIST1H1E	P10412	219 aa	Known RBP	4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	ZNF266	Q14584	549 aa		4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	GUK1	Q16774	197 aa		4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	C14orf178	Q8N769	122 aa	Predicted RBP	4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872	CHCHD7	Q9BUK0	85 aa		4.23	□□□□□ -1.73
SMIM7-218	ENST00000599872		A0A087WWL8	130 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872		A0A0B4J2A0	478 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	LOC100506127	A0A0U1RQW1	187 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	GOSR2	O14653	212 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	IFNA7	P01567	189 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	CAV2	P51636	162 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	RPP30	P78346	268 aa	Known RBP	4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	MPV17L2	Q567V2	206 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	C10orf113	Q5VZT2	155 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872		Q6AWC8	147 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	FAAP20	Q6NZ36	180 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	SHPK	Q9UHJ6	478 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	PRELID1	Q9Y255	219 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	TIMM9	Q9Y5J7	89 aa		4.22	□□□□□ -1.73
SMIM7-218	ENST00000599872	SSPO	A2VEC9	5147 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	IGLV10-54	A0A075B6I4	117 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872		A0A096LNI7	61 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	PGPEP1L	A6NFU8	196 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	CTDSPL	O15194	276 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	CIDEA	O60543	219 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	NDUFS6	O75380	124 aa	Known RBP	4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	TGFBR1	P36897	503 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	MIA	Q16674	131 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	IZUMO2	Q6UXV1	221 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	OR51S1	Q8NGJ8	323 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	NRG4	Q8WWG1	115 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	CDIP1	Q9H305	208 aa		4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	STRAP	Q9Y3F4	350 aa	Known RBP	4.21	□□□□□ -1.74
SMIM7-218	ENST00000599872	FAM24A	A6NFZ4	105 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872		K7EPK0	472 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	SYNGR2	O43760	224 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	RAB3D	O95716	219 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	PYY	P10082	97 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	ZNF506	Q5JVG8	444 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	PXDC1	Q5TGL8	231 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	CIB3	Q96Q77	187 aa	Predicted RBP	4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	ATP5S	Q99766	215 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	GFRA4	Q9GZZ7	299 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	SDF2L1	Q9HCN8	221 aa		4.2	□□□□□ -1.74
SMIM7-218	ENST00000599872	IGLV1-50	A0A075B6I6	118 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	DIRC3	C9JPN6	131 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	MED6	O75586	246 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	FGF8	P55075	233 aa	Predicted RBP	4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	OR2G3	Q8NGZ4	309 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	KRTAP4-1	Q9BYQ7	146 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	PARL	Q9H300	379 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	AAMDC	Q9H7C9	122 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	JPT2	Q9H910	190 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	NPVF	Q9HCQ7	196 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	SLC39A9	Q9NUM3	307 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	CCDC59	Q9P031	241 aa	Known RBP	4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	GPR132	Q9UNW8	380 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	KCNIP3	Q9Y2W7	256 aa		4.19	□□□□□ -1.74
SMIM7-218	ENST00000599872	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	TRBV7-9	A0A0J9YWB2	115 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	SMIM31	A0A1B0GVY4	71 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	CRYGA	P11844	174 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	RPS10	P46783	165 aa	Known RBP	4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	RAB5C	P51148	216 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	LINC00269	Q8N2A0	174 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	FER1L6-AS1	Q8NA97	138 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	OR10G7	Q8NGN6	311 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	ASB13	Q8WXK3	278 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	MGST2	Q99735	147 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	RETNLB	Q9BQ08	111 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	GPN1	Q9HCN4	374 aa	Predicted RBP	4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	COMMD3	Q9UBI1	195 aa		4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	MACF1	Q9UPN3	7388 aa	Known RBP	4.18	□□□□□ -1.74
SMIM7-218	ENST00000599872	USH2A	O75445	5202 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872	TRAV1-1	A0A0B4J248	108 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872		F6UZH7	168 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872	MT-ND6	P03923	174 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872	KRTAP1-4	P0C5Y4	121 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872	METTL15P1	P0C7V9	234 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872	TBP	P20226	339 aa		4.17	□□□□□ -1.74
SMIM7-218	ENST00000599872	RPS19	P39019	145 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms