RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	C15orf54	Q8N8G6	183 aa		3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	OR2T35	Q8NGX2	323 aa		3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	PRSS3P2	Q8NHM4	247 aa		3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	LINC00479	Q96M42	142 aa		3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	CIB3	Q96Q77	187 aa	Predicted RBP	3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	NAGK	Q9UJ70	344 aa		3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	STRAP	Q9Y3F4	350 aa	Known RBP	3.9	□□□□□ -1.79
DNMT1-222	ENST00000590619	SYNE2	Q8WXH0	6885 aa	Known RBP	3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619		A0A087WXM4	84 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	IGKV2-24	A0A0C4DH68	120 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	PGPEP1L	A6NFU8	196 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	AGPAT2	O15120	278 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	COX7A2P2	O60397	106 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	RAB3D	O95716	219 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	IFNA7	P01567	189 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	TYMS	P04818	313 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	HOXB5	P09067	269 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	TBP	P20226	339 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	LOR	P23490	312 aa	Predicted RBP	3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	VAMP1	P23763	118 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	TGFBR1	P36897	503 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	FAAP20	Q6NZ36	180 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	KCNIP4	Q6PIL6	250 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	CROCCP3	Q8IVE0	287 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	C14orf178	Q8N769	122 aa	Predicted RBP	3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	TMEM229B	Q8NBD8	167 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	INO80E	Q8NBZ0	244 aa	Predicted RBP	3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	NDUFA13	Q9P0J0	144 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	MTFP1	Q9UDX5	166 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	TIMM9	Q9Y5J7	89 aa		3.89	□□□□□ -1.79
DNMT1-222	ENST00000590619	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	DIRC3	C9JPN6	131 aa		3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	NDUFS6	O75380	124 aa	Known RBP	3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	CRP	P02741	224 aa		3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	ANG	P03950	147 aa	Known RBP	3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	FGF8	P55075	233 aa	Predicted RBP	3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	MIA	Q16674	131 aa		3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	SOST	Q9BQB4	213 aa		3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	AP5S1	Q9NUS5	200 aa		3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	COMMD3	Q9UBI1	195 aa		3.88	□□□□□ -1.79
DNMT1-222	ENST00000590619	CCDC160	A6NGH7	325 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	FNDC10	F2Z333	226 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	APOA1	P02647	267 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	PYY	P10082	97 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	SLC25A6	P12236	298 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	CAV2	P51636	162 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	TAS2R19	P59542	299 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	GABARAPL2	P60520	117 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	PDE6H	Q13956	83 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	CNPY1	Q3B7I2	92 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	MPV17L2	Q567V2	206 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	PTH2	Q96A98	100 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	MGST2	Q99735	147 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	RBM38	Q9H0Z9	239 aa	Known RBP	3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	PRR34	Q9NV39	138 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	PSENEN	Q9NZ42	101 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	TMEM14C	Q9P0S9	112 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619	BLOC1S6	Q9UL45	172 aa		3.87	□□□□□ -1.79
DNMT1-222	ENST00000590619		A0A087WWL8	130 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	FAM24A	A6NFZ4	105 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	TSPAN13	O95857	204 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	ID3	Q02535	119 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	ARL16	Q0P5N6	197 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	ZNF506	Q5JVG8	444 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	UFSP1	Q6NVU6	142 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	ZFP2	Q6ZN57	461 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619		Q6ZRG5	221 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	OR10G7	Q8NGN6	311 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	OR2G3	Q8NGZ4	309 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	ATP5S	Q99766	215 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	GFRA4	Q9GZZ7	299 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	PARL	Q9H300	379 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	AAMDC	Q9H7C9	122 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	JPT2	Q9H910	190 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	SDF2L1	Q9HCN8	221 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	VCX3A	Q9NNX9	186 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	SLC39A9	Q9NUM3	307 aa		3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	CCDC59	Q9P031	241 aa	Known RBP	3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	RSL24D1	Q9UHA3	163 aa	Known RBP	3.86	□□□□□ -1.79
DNMT1-222	ENST00000590619	IGLV10-54	A0A075B6I4	117 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	IGLV1-50	A0A075B6I6	118 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619		A0A096LNI7	61 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	TRAV21	A0A0B4J279	112 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	RBAKDN	A6NC62	111 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	DISC1	C4P0D8	188 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	HPGDS	O60760	199 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	METTL15P1	P0C7V9	234 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	RPS10	P46783	165 aa	Known RBP	3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	SRPX	P78539	464 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	NEDD8	Q15843	81 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	MIC13	Q5XKP0	118 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	CLPSL2	Q6UWE3	100 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	TMEM14EP	Q6UXP3	125 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	LINC00269	Q8N2A0	174 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	C12orf45	Q8N5I9	185 aa	Predicted RBP	3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	ASB13	Q8WXK3	278 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	TVP23C	Q96ET8	276 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	SMIM8	Q96KF7	97 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	C9orf85	Q96MD7	179 aa		3.85	□□□□□ -1.79
DNMT1-222	ENST00000590619	GPN1	Q9HCN4	374 aa	Predicted RBP	3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms