RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 URGCP-MRPS24S4R325 110 aa9.33□□□□□ -0.92
VMP1-202ENST00000585847 AGRNO00468 2067 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 C7orf71A4D174 169 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 HIGD1CA8MV81 97 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 CTRLP40313 264 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 CRIP1P50238 77 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 STHQ8IWL8 128 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 C8orf49Q96NF6 230 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
VMP1-202ENST00000585847 HLA-DQA1P01909 254 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 ORM1P02763 201 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 RAB5BP61020 215 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 RIGQ13278 110 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 ZNF124Q15973 351 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 AMTNQ6UX39 209 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 LINC00322Q6ZN03 302 aaPredicted RBP9.31□□□□□ -0.92
VMP1-202ENST00000585847 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
VMP1-202ENST00000585847 A0A1B0GUT8 65 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 C1orf196B1AJZ1 125 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 F6UB75 175 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 INSP01308 110 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 OR5AL1P0C617 328 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 CACNG7P62955 275 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 HBBP68871 147 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 FAM159AQ6UWV7 190 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
VMP1-202ENST00000585847 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.3□□□□□ -0.92
VMP1-202ENST00000585847 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
VMP1-202ENST00000585847 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
VMP1-202ENST00000585847 TRGV11A0A075B6L2 103 aa9.29□□□□□ -0.92
VMP1-202ENST00000585847 IGLC6P0CF74 106 aa9.29□□□□□ -0.92
VMP1-202ENST00000585847 ASIPP42127 132 aa9.29□□□□□ -0.92
VMP1-202ENST00000585847 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
VMP1-202ENST00000585847 ZNF80P51504 273 aaPredicted RBP9.29□□□□□ -0.92
VMP1-202ENST00000585847 DEFB125Q8N687 156 aa9.29□□□□□ -0.92
VMP1-202ENST00000585847 FER1L6-AS1Q8NA97 138 aa9.29□□□□□ -0.92
VMP1-202ENST00000585847 NDUFAF3Q9BU61 184 aa9.29□□□□□ -0.92
VMP1-202ENST00000585847 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
VMP1-202ENST00000585847 A0A1B0GXF2 115 aa9.28□□□□□ -0.92
VMP1-202ENST00000585847 RNASE4P34096 147 aaKnown RBP9.28□□□□□ -0.92
VMP1-202ENST00000585847 DEFB1P60022 68 aa9.28□□□□□ -0.92
VMP1-202ENST00000585847 GFI1BQ5VTD9 330 aa9.28□□□□□ -0.92
VMP1-202ENST00000585847 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
VMP1-202ENST00000585847 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
VMP1-202ENST00000585847 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 A8MZ25 164 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 SNAI2O43623 268 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 CA1P00915 261 aaPredicted RBP9.27□□□□□ -0.93
VMP1-202ENST00000585847 ZNF705DP0CH99 300 aaPredicted RBP9.27□□□□□ -0.93
VMP1-202ENST00000585847 ZNF705BP0CI00 300 aaPredicted RBP9.27□□□□□ -0.93
VMP1-202ENST00000585847 IGHV4-30-4P0DP06 118 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 TCL1AP56279 114 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 DEFB121Q5J5C9 76 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 GDF5OSQ5U4N7 250 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 GTSF1Q8WW33 167 aa9.27□□□□□ -0.93
VMP1-202ENST00000585847 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
VMP1-202ENST00000585847 IGHV4-4A0A075B6R2 117 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 KIR2DL5BA0A0G2JN68 375 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 KIR2DL5BA0A0G2JPC4 375 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 RBMY1BA6NDE4 496 aaKnown RBP9.26□□□□□ -0.93
VMP1-202ENST00000585847 RBMY1EA6NEQ0 496 aaKnown RBP9.26□□□□□ -0.93
VMP1-202ENST00000585847 ZNF324O75467 553 aaPredicted RBP9.26□□□□□ -0.93
VMP1-202ENST00000585847 RBMY1DP0C7P1 496 aaKnown RBP9.26□□□□□ -0.93
VMP1-202ENST00000585847 S100A4P26447 101 aaKnown RBP9.26□□□□□ -0.93
VMP1-202ENST00000585847 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 SMIM15Q7Z3B0 74 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 KIR2DL5AQ8N109 375 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 FRZBQ92765 325 aa9.26□□□□□ -0.93
VMP1-202ENST00000585847 IGHV1OR15-1A0A075B7D0 117 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 PRB4P10163 310 aaPredicted RBP9.25□□□□□ -0.93
VMP1-202ENST00000585847 SPINK13Q1W4C9 94 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 PRR9Q5T870 116 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 ZNF493Q6ZR52 646 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 COL7A1Q02388 2944 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 TENM3Q9P273 2699 aa9.25□□□□□ -0.93
VMP1-202ENST00000585847 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 TRGC1P0CF51 173 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 ZFP82Q8N141 532 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 PTH2Q96A98 100 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 PGLYRP4Q96LB8 373 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 SCRT2Q9NQ03 307 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 GOLT1BQ9Y3E0 138 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 HUWE1Q7Z6Z7 4374 aaKnown RBP9.24□□□□□ -0.93
VMP1-202ENST00000585847 RYR3Q15413 4870 aa9.24□□□□□ -0.93
VMP1-202ENST00000585847 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 M0R2Z0 102 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 NXPH4O95158 308 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 FRMD6-AS1P0C7T7 363 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 APOC4P55056 127 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 MRPL54Q6P161 138 aaKnown RBP9.23□□□□□ -0.93
VMP1-202ENST00000585847 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms