RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 Q6ZQT7 251 aa7.14□□□□□ -1.27
CASC3-208ENST00000583649 NRARPQ7Z6K4 114 aa7.14□□□□□ -1.27
CASC3-208ENST00000583649 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
CASC3-208ENST00000583649 Q8TAT8 98 aa7.14□□□□□ -1.27
CASC3-208ENST00000583649 RNF185Q96GF1 192 aa7.14□□□□□ -1.27
CASC3-208ENST00000583649 SLC25A21Q9BQT8 299 aaPredicted RBP7.14□□□□□ -1.27
CASC3-208ENST00000583649 A0A087WXM4 84 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 IGHV3-73A0A0B4J1V6 119 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 TAAR5O14804 337 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 AP3S2P59780 193 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 CFAP126Q5VTH2 177 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 WDR73Q6P4I2 378 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 NIT1Q86X76 327 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 Q8N3U1 123 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 FUNDC2Q9BWH2 189 aa7.13□□□□□ -1.27
CASC3-208ENST00000583649 RSL24D1Q9UHA3 163 aaKnown RBP7.13□□□□□ -1.27
CASC3-208ENST00000583649 L7N2F9 121 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 GNRH2O43555 120 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 SCGB1D2O95969 90 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 NBEAP1P0C6P0 100 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 RPL29P47914 159 aaKnown RBP7.12□□□□□ -1.27
CASC3-208ENST00000583649 VAMP2P63027 116 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 MIC13Q5XKP0 118 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 ATRAIDQ6UW56 229 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 MCFD2Q8NI22 146 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 ASB13Q8WXK3 278 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 DIRAS2Q96HU8 199 aa7.12□□□□□ -1.27
CASC3-208ENST00000583649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
CASC3-208ENST00000583649 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 PYYP10082 97 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 GAGE1Q13065 139 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 GAGE4Q13068 117 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 GAGE5Q13069 117 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 DMRTA1Q5VZB9 504 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
CASC3-208ENST00000583649 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.1□□□□□ -1.27
CASC3-208ENST00000583649 USP17L23D6RBM5 183 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 HLA-DQA1P01909 254 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 TYMSP04818 313 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 BCAP31P51572 246 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 BAXQ07812 192 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 PPP1R1AQ13522 171 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 TMED6Q8WW62 240 aa7.1□□□□□ -1.27
CASC3-208ENST00000583649 TMEM262E9PQX1 116 aa7.09□□□□□ -1.27
CASC3-208ENST00000583649 ZFP2Q6ZN57 461 aa7.09□□□□□ -1.27
CASC3-208ENST00000583649 SDIM1Q6ZPB5 146 aa7.09□□□□□ -1.27
CASC3-208ENST00000583649 IGHV3-64A0A075B6Q5 118 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 A8MWV9 139 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 PKIAP61925 76 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 FAM74A1Q5RGS3 127 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 SPINK6Q6UWN8 80 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 CMTM2Q8TAZ6 248 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 DEDD2Q8WXF8 326 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 PTH2Q96A98 100 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 AP5S1Q9NUS5 200 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 GSKIPQ9P0R6 139 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
CASC3-208ENST00000583649 PHOX2AO14813 284 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 PRSS1P07477 247 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 S100A11P31949 105 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 CAV2P51636 162 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
CASC3-208ENST00000583649 HBG1P69891 147 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 HBG2P69892 147 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 ARL16Q0P5N6 197 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 CIRBPQ14011 172 aaKnown RBP7.07□□□□□ -1.28
CASC3-208ENST00000583649 MIAQ16674 131 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 IAH1Q2TAA2 248 aaPredicted RBP7.07□□□□□ -1.28
CASC3-208ENST00000583649 TOMM5Q8N4H5 51 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.07□□□□□ -1.28
CASC3-208ENST00000583649 NDFIP1Q9BT67 221 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 NMES1Q9C002 83 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 MIXL1Q9H2W2 232 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
CASC3-208ENST00000583649 KIF25-AS1Q9Y6Z4 181 aa7.07□□□□□ -1.28
CASC3-208ENST00000583649 A0A087WYN8 130 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 UBE2L5PA0A1B0GUS4 154 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 C7orf66A4D0T2 115 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 PVALBP20472 110 aaPredicted RBP7.06□□□□□ -1.28
CASC3-208ENST00000583649 OR2T35Q8NGX2 323 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 OR2G3Q8NGZ4 309 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 CHAC2Q8WUX2 184 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 GTSF1Q8WW33 167 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 DNAJC30Q96LL9 226 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 SLC25A2Q9BXI2 301 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
CASC3-208ENST00000583649 C9orf170A2RU37 121 aa7.05□□□□□ -1.28
CASC3-208ENST00000583649 CTDSP2O14595 271 aa7.05□□□□□ -1.28
CASC3-208ENST00000583649 FGF7P21781 194 aa7.05□□□□□ -1.28
CASC3-208ENST00000583649 LGALSLQ3ZCW2 172 aaPredicted RBP7.05□□□□□ -1.28
CASC3-208ENST00000583649 PIK3CD-AS1Q5SR53 167 aa7.05□□□□□ -1.28
CASC3-208ENST00000583649 STX12Q86Y82 276 aa7.05□□□□□ -1.28
CASC3-208ENST00000583649 MRPS26Q9BYN8 205 aaKnown RBP7.05□□□□□ -1.28
CASC3-208ENST00000583649 KCNIP2Q9NS61 270 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms