RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NUDT3O95989 172 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 GCGP01275 180 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 IGLV2-11P01706 119 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 EIF5AL1Q6IS14 154 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 HIST1H2BAQ96A08 127 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 LINC00479Q96M42 142 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 MRPL16Q9NX20 251 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 MDFICQ9P1T7 246 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 PAGE4O60829 102 aa8.85□□□□□ -0.99
SMARCE1-218ENST00000582955 H2AFB1P0C5Y9 115 aa8.85□□□□□ -0.99
SMARCE1-218ENST00000582955 SMUG1Q53HV7 270 aa8.85□□□□□ -0.99
SMARCE1-218ENST00000582955 SAPCD1Q5SSQ6 148 aa8.85□□□□□ -0.99
SMARCE1-218ENST00000582955 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
SMARCE1-218ENST00000582955 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
SMARCE1-218ENST00000582955 VPS13DQ5THJ4 4388 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 TRAV26-1A0A087WT03 109 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 A0A0J9YY99 117 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 GNRH2O43555 120 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 HOXA5P20719 270 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 ZNF80P51504 273 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 LGALS9BQ3B8N2 356 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 TDRG1Q3Y452 100 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 Q86TA4 180 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 POM121L12Q8N7R1 296 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 KCNS1Q96KK3 526 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -0.99
SMARCE1-218ENST00000582955 IGHV3-53P01767 116 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 TYMSP04818 313 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
SMARCE1-218ENST00000582955 UBE2G1P62253 170 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 SLC51BQ86UW2 128 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 C18orf15Q96N68 181 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 TCEAL7Q9BRU2 100 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 SPXQ9BT56 116 aa8.83□□□□□ -1
SMARCE1-218ENST00000582955 IGHV3-16A0A0C4DH30 117 aa8.82□□□□□ -1
SMARCE1-218ENST00000582955 AKR1C3P42330 323 aa8.82□□□□□ -1
SMARCE1-218ENST00000582955 RAB5CP51148 216 aa8.82□□□□□ -1
SMARCE1-218ENST00000582955 FMC1Q96HJ9 113 aa8.82□□□□□ -1
SMARCE1-218ENST00000582955 A0A1B0GVG6 124 aa8.81□□□□□ -1
SMARCE1-218ENST00000582955 SULT1A2P50226 295 aa8.81□□□□□ -1
SMARCE1-218ENST00000582955 RNF212Q495C1 297 aa8.81□□□□□ -1
SMARCE1-218ENST00000582955 C9orf62Q8N4C0 152 aa8.81□□□□□ -1
SMARCE1-218ENST00000582955 GNG13Q9P2W3 67 aa8.81□□□□□ -1
SMARCE1-218ENST00000582955 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
SMARCE1-218ENST00000582955 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
SMARCE1-218ENST00000582955 TEX46H3BTG2 121 aa8.8□□□□□ -1
SMARCE1-218ENST00000582955 M0R2P5 195 aa8.8□□□□□ -1
SMARCE1-218ENST00000582955 ZFP30Q9Y2G7 519 aa8.8□□□□□ -1
SMARCE1-218ENST00000582955 IGLV2-18A0A075B6J9 118 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 SFTA3P0C7M3 94 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 CCL18P55774 89 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 CCL20P78556 96 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 RASL10AQ92737 203 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 ZC2HC1AQ96GY0 325 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 MANBALQ9NQG1 85 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
SMARCE1-218ENST00000582955 TRAV1-1A0A0B4J248 108 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 TRGV4A0A0C4DH28 118 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 TRBV6-1A0A0K0K1D8 114 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 C9JCJ5 164 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 H3BNG1 76 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 J3QL48 77 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 M0R2N4 97 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 PAX4O43316 350 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 ORM1P02763 201 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 ZNF479Q96JC4 524 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 MUC4Q99102 2169 aa8.78□□□□□ -1
SMARCE1-218ENST00000582955 IGKV3D-20A0A0C4DH25 116 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 M0R036 132 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 SH2D1AO60880 128 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 LTAP01374 205 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 S100A9P06702 114 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 S100A4P26447 101 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 FAM3BP58499 235 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 SLAQ13239 276 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 FHL2Q14192 279 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 FAM162BQ5T6X4 162 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 OR4C5Q8NGB2 326 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 PRO0255Q9UI72 69 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 HHLA3Q9XRX5 114 aa8.77□□□□□ -1.01
SMARCE1-218ENST00000582955 TRAV4A0A0B4J268 109 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 B4DEV8 164 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 IFNA1P01562 189 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 RNASE3P12724 160 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 ASIPP42127 132 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 CRIP1P50238 77 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 NKX2-5P52952 324 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 CRYBA4P53673 196 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 COX8CQ7Z4L0 72 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
SMARCE1-218ENST00000582955 A0A096LPF7 62 aa8.75□□□□□ -1.01
SMARCE1-218ENST00000582955 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms